New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4284715 | 32 (0.650) | 3 (0.070) | 3/244 | NT | 8.2% | coding (120/849 nt) | hbd | 3‑hydroxybutyryl‑CoA dehydrogenase |
? | NC_002947 | = 4284742 | 37 (0.810) | coding (147/849 nt) | hbd | 3‑hydroxybutyryl‑CoA dehydrogenase |
GAGCATTGAAAAGATCGCCGTGATCGGCGCGGGCACCATGGGCAACGGCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAGGCGGCTACCGAGAACCTGCAGCTCAAG > NC_002947/4284598‑4284886 | gAGCATTGAAAAGATCGCCGTGATCGGCGCGGGCACCATGGGCAACGGCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACctc < 8:34000‑M2/148‑4 (MQ=255) aGCATTGAAAAGATCGCCGTGATCGGCGCGGGCACCATGGGCAACGGCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACctcga > 8:15217‑M2/1‑144 (MQ=255) aGCATTGAAAAGATCGCCGTGATCGGCGCGGGCACCATGGGCAACGGCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACctcga > 7:34000‑M2/1‑144 (MQ=255) gCATTGAAAAGATCGCCGTGATCGGCGCGGGCACCATGGGCAACGGCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACctcgag > 5:204857‑M2/1‑143 (MQ=255) gCATTGAAAAGATCGCCGTGATCGGCGCGGGCACCATGGGCAACGGCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACctcgag > 7:230598‑M2/1‑143 (MQ=255) ttGAAAAGATCGCCGTGATCGGCGCGGGCACCATGGGCAACGGCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACctcgagcgc < 6:30242‑M2/149‑10 (MQ=255) tCGCCGTGATCGGCGCGGGCACCATGGGCAACGGCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGc < 6:32240/149‑1 (MQ=255) gcgcGGGCACCATGGGCAACGGCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACtctc < 6:308580/149‑1 (MQ=255) cAACGGCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGcc > 8:121892/1‑148 (MQ=255) cAACGGCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGcc < 7:121892/148‑1 (MQ=255) aCGGCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCa < 7:87039/149‑1 (MQ=255) gCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAgcc < 3:271206/149‑1 (MQ=255) ttGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAgccgcc < 1:219906/149‑1 (MQ=255) ttGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAgccgc > 5:259525/1‑148 (MQ=255) cccAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCaaa > 5:212212/1‑149 (MQ=255) ttGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTAcc < 7:89991/149‑1 (MQ=255) ccGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAg > 6:12765/1‑148 (MQ=255) tACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACAGa > 1:203233/1‑149 (MQ=255) gTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTacac > 5:280110/1‑149 (MQ=255) ctgGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCt > 7:141592/1‑149 (MQ=255) gtggATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCg > 3:128211/1‑116 (MQ=255) gtggATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCg < 4:128211/116‑1 (MQ=255) tCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGc < 7:225383/136‑1 (MQ=255) tCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGc > 8:225383/1‑136 (MQ=255) ccGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAg > 2:111224/1‑149 (MQ=255) ccGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAg > 2:266200/1‑149 (MQ=255) gCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGt < 6:259525/149‑1 (MQ=255) cAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACctcgagcgctgcgtcggaaacatccaccagcagcacctggtagccggcaatggcgcacacctgggcaatgccgttgcccatggtgcccgcgccgatcacggcgatctttt < 3:299766‑M2/148‑111 (MQ=255) cAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTg < 6:212212/149‑1 (MQ=255) gcgcTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACctcgagcgctgcgtcggaaacatccaccagcagcacctggtagccggcaatggcgcacacctgggcaatgccgttgcccatggtgcccgcgccgatcacgg > 3:245663‑M2/1‑36 (MQ=255) gcgcTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACctcgagcgctgcgtcggaaacatccaccagcagcacctggtagccggcaatggcgcacacctgggcaatgccgttgcccatggtgcccgcgccgatcacgg < 4:245663‑M2/137‑102 (MQ=255) gAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCt < 5:173778/129‑1 (MQ=255) gAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCt > 6:173778/1‑129 (MQ=255) gAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAggc < 6:238475/149‑1 (MQ=255) gcgcGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAggcgg < 5:30242/149‑1 (MQ=255) gtgtGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTaca < 2:171117/108‑1 (MQ=255) gCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAGGCGGCTACCg < 3:302990/145‑1 (MQ=255) gCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAGGCGGCTACCg > 4:302990/1‑145 (MQ=255) gCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAGGCGGCTACCGAGaa > 4:8812/1‑149 (MQ=255) ccACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAGGCGGCTACCGAGAAc > 5:394/1‑149 (MQ=255) ccACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAGGCGGCTACCGAGAAc < 1:266200/149‑1 (MQ=255) cTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAGGCGGCTACCGAGAACCTg > 8:31758/1‑148 (MQ=255) gAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAGGCGGCTACCGAGAACCTGCAg < 1:111224/148‑1 (MQ=255) cAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAGGCGGCTACCgaga < 6:141665/137‑1 (MQ=255) cAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAGGCGGCTACCgaga > 5:141665/1‑137 (MQ=255) cAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCCAGGCGGCTACCGAGAACCTGCAGCTc > 5:174775/1‑148 (MQ=255) gAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAGGCGGCTACCGAGAACCTGCAGCTCAag > 2:185449/1‑148 (MQ=255) | GAGCATTGAAAAGATCGCCGTGATCGGCGCGGGCACCATGGGCAACGGCATTGCCCAGGTGTGCGCCATTGCCGGCTACCAGGTGCTGCTGGTGGATGTTTCCGACGCAGCGCTCGAGCGCGGTGTGGCCACCTTGAGCAAGAACCTCGAGCGCCAGGTCAGCAAGGGCACTCTCGACGCCGACAAGGCCGCAGCCGCCAAAGCCCGCATCCGTACCAGCACCGACTACACCCAGCTCAGCGCTGCACAGCTGGTGATCGAGGCGGCTACCGAGAACCTGCAGCTCAAG > NC_002947/4284598‑4284886 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |