New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4590013 =	43 (0.880)	3 (0.060)	3/250	NT	7.2%	coding (695/1608 nt)	mccB	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
	?	NC_002947	4590056 =	36 (0.770)					coding (738/1608 nt)	mccB	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta

CCGACGAAGCGATCATGGTGCGCCAGCAGGCGACCATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCGG  >  NC_002947/4589914‑4590201                                                                                                                                               |                                                                                                                                                  ccGACGAAGCGATCATGGTGCGCCAGCACGCGACCATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTAt                                                                                                                                             >  1:175062/1‑149 (MQ=255)     ccaaccgctgcagcttgccgagcttgtgccagttgaggttgaccacactgcgtcgcgcgatggccagggcgtgttcgtcgttgtcggcataatggTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGcc                                                                                                                                          >  6:237978‑M1/96‑148 (MQ=255)           gATCATGGTGCGCCAGCAGGCGACCATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAacg                                                                                                                                   <  4:150939/149‑1 (MQ=255)            aTCATGGTGCGCCAGCAGGCGACCATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAacga                                                                                                                                  >  7:290996/1‑149 (MQ=255)             tCATGGTGCGCCAGCAGGCGACCATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAacgac                                                                                                                                 <  5:147032/149‑1 (MQ=255)                tGGTGCGCCAGCAGGCGACCATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGaa                                                                                                                              >  8:28318/1‑149 (MQ=255)                tGGTGCGCCAGCAGGCGACCATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGaa                                                                                                                              <  4:262569/149‑1 (MQ=255)                         agcagGCGACCATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTg                                                                                                                     <  2:175062/149‑1 (MQ=255)                                gACCATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCTTCGCCTACCATTATGCCGACAACGAGGAACACGCCCTGTCCATct                                                                                                              <  4:195909/149‑2 (MQ=255)                                   cATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATcgcgc                                                                                                           >  7:128510/1‑149 (MQ=255)                                          cTCGCCGGCCCGCCGCTGGTGAAAGCCGCCTCCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAac                                                                                                                                    >  1:23949/1‑117 (MQ=255)                                          cTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAac                                                                                                                                    <  2:23949/117‑1 (MQ=255)                                             gCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAgtgt                                                                                                 >  5:47517/1‑149 (MQ=255)                                             gCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAgtg                                                                                                  <  2:62208/148‑1 (MQ=255)                                             gCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAgt                                                                                                   <  1:267893/147‑1 (MQ=255)                                               cGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTgg                                                                                               <  8:128510/149‑1 (MQ=255)                                                     gccgcTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAAcc                                                                                         <  2:29704/149‑1 (MQ=255)                                                         cTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCaa                                                                                     <  8:20997/149‑1 (MQ=255)                                                            gTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTg                                                                                  <  8:115453/149‑1 (MQ=255)                                                              gAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTgg                                                                                 >  2:43822/1‑148 (MQ=255)                                                              gAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTgg                                                                                 <  1:43822/148‑1 (MQ=255)                                                               aaaGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGca                                                                               <  8:290996/149‑1 (MQ=255)                                                               aaaGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGc                                                                                <  7:28318/148‑1 (MQ=255)                                                                aaGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGcac                                                                              <  6:183898/149‑1 (MQ=255)                                                                       cACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCg                                                                       <  6:47517/149‑1 (MQ=255)                                                                                          ggcataatggtcggcgacgccgctggtgcggcaatgcacatcggcgccgccgaCCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGTCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTgg                                                     >  6:237978‑M2/54‑148 (MQ=255)                                                                                            cGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAAc                                                                                          >  6:293144/1‑109 (MQ=255)                                                                                            cGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAAc                                                                                          <  5:293144/109‑1 (MQ=255)                                                                                            cGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTc                                                                                       <  3:290462/112‑1 (MQ=255)                                                                                            cGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTc                                                                                       >  4:290462/1‑112 (MQ=255)                                                                                                     CGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCAc                                         <  8:398‑M1/149‑1 (MQ=255)                                                                                                       gcgacgccgctggtgcggcaatgcacatcggcgccgccgaCCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTgg                                                                                 >  1:295589‑M2/41‑107 (MQ=255)                                                                                                       gcgacgccgctggtgcggcaatgcacatcggcgccgccgaCCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTgg                                                                                 <  2:295589‑M2/67‑1 (MQ=255)                                                                                                               gATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGc                               >  3:258830/1‑149 (MQ=255)                                                                                                                aTGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCa                                          <  1:270412/137‑1 (MQ=255)                                                                                                                aTGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCa                                          >  2:270412/1‑137 (MQ=255)                                                                                                                     cATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCa                                          >  7:238519/1‑132 (MQ=255)                                                                                                                     cATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCa                                          <  8:238519/132‑1 (MQ=255)                                                                                                                            gCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTg                  >  7:234244/1‑149 (MQ=255)                                                                                                                            gCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTg                  >  4:25220/1‑149 (MQ=255)                                                                                                                                cAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACg              >  2:117666/1‑149 (MQ=255)                                                                                                                                     gcgTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTg         <  2:233852/149‑1 (MQ=255)                                                                                                                                           ccgaCCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCg   >  6:118654‑M2/5‑149 (MQ=255)                                                                                                                                            cgcccATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCACTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCTATGAGCTGTACGGCGTGGTTCCgg  >  3:291448/4‑149 (MQ=255)                                                                                                                                              aCCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCttt                                   <  4:154736‑M2/113‑1 (MQ=255)                                                                                                                                              aCCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCttt                                   >  3:154736‑M2/2‑114 (MQ=255)                                                                                                                                               |                                                                                                                                                  CCGACGAAGCGATCATGGTGCGCCAGCAGGCGACCATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGCGCGACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCGG  >  NC_002947/4589914‑4590201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.