New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4921664	42 (0.860)	5 (0.110)	4/250	NT	11.1%	coding (2073/2682 nt)	PP_4330	toxin‑like protein
	?	NC_002947	= 4921727	40 (0.860)					coding (2136/2682 nt)	PP_4330	toxin‑like protein

CAGCCCGGGCCCCAGGGCTGCAGGTATTGCCGCTTGAAGAGCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGCACCCCACCCGATGGGCTGCTGCTGCCACCGCCGATGTCCA  >  NC_002947/4921579‑4921872                                                                                                                                                     |                                                                                                                                                  cAGCCCGGGCCCCAGGGCTGCAGGTATTGCCGCTTGAAGAGCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGAtgtg                                                                                                                                                   <  4:248353/149‑1 (MQ=255)  aGCCCGGGCCCCAGGGCTGCAGGTATTGCCGCTTGAAGAGCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGc                                                                                                                                                  >  4:91491‑M2/1‑148 (MQ=255)    cccGGGCCCCAGGGCTGCAGGTATTGCCGCTTGAAGAGCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGctg                                                                                                                                                >  4:76288‑M2/1‑146 (MQ=255)     ccGGGCCCCAGGGCTGCAGGTATTGCCGCTTGAAGAGCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGctgc                                                                                                                                               <  8:78322‑M2/149‑5 (MQ=255)           cccAGGGCTGCAGGTATTGCCGCTTGAAGAGCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTAcc                                                                                                                                         <  1:141710/149‑1 (MQ=255)             cAGGGCTGCAGGTATTGCCGCTTGAAGAGCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCg                                                                                                                                        >  1:295700/1‑148 (MQ=255)                        gTATTGCCGCTTGAAGAGCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTGCCGGATGCTGCACCa                                                                                                                            >  6:202175/1‑149 (MQ=255)                             gCCGCTTGAAGAGCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAgg                                                                                                                       >  8:179330/1‑149 (MQ=255)                              ccGCTTGAAGAGCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGAAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAggg                                                                                                                      >  1:233761/1‑149 (MQ=255)                               cGCTTGAAGAGCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGt                                                                                                                     <  3:210179/149‑1 (MQ=255)                               cGCTTGAAGAGCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGt                                                                                                                     >  8:176554/1‑149 (MQ=255)                                      agagCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGt                                                                                                              <  3:43703/149‑1 (MQ=255)                                           aaGGCGTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACAtg                                                                                                         <  8:254052/149‑1 (MQ=255)                                             ggCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACAtgga                                                                                                       >  1:488/1‑149 (MQ=255)                                              gCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACAtggac                                                                                                      <  4:298453/149‑1 (MQ=255)                                                     ccGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACAtggacgtggac                                                                                                >  5:216377/1‑148 (MQ=255)                                                         gCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAGCGGTGGCTTCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTgg                                                                                                                   >  1:11187/1‑125 (MQ=255)                                                         gCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAGCGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTgg                                                                                                                   <  2:11187/125‑1 (MQ=255)                                                              cTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCct                                                                                        <  7:176554/147‑1 (MQ=255)                                                                 ccAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGATTTCCtgctgc                                                                                   >  1:153324/1‑149 (MQ=255)                                                                 ccAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCctgc                                                                                      <  2:295700/146‑1 (MQ=255)                                                                      gCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGAc                                                                              <  7:11911/149‑1 (MQ=255)                                                                       ccGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACGGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACg                                                                             <  4:185551/149‑1 (MQ=255)                                                                         gCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACgg                                                                            >  6:167537/1‑148 (MQ=255)                                                                         gCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGc                                                                           <  3:225008/149‑1 (MQ=255)                                                                          cTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGctgcgcgtaatagcggctctggcagaaggcccggaagaagccttgctcttcaagcggcaatacctgcagccct                                                                          <  6:132525‑M2/149‑74 (MQ=255)                                                                           tATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCATTTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCGTTACATGGACGTGGACGACTTCCTGCTGGCGGACGGc                                                                           >  6:138445/1‑147 (MQ=255)                                                                               aCGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGTCCGGCagcag                                                                      <  7:78322/148‑5 (MQ=255)                                                                                 gcgcAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGctgcgcgtaatagcggctctggcagaaggcccggaagaagccttgctcttcaagcggcaatacctgcagccctggggccc                                                                   <  6:258070‑M2/149‑81 (MQ=255)                                                                                 gcgcAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGctgcgcgtaatagcggctctggcagaaggcccggaagaagccttgctcttcaagcggcaatacctgcagccctggggccc                                                                   <  7:87097‑M2/149‑81 (MQ=255)                                                                                  cgcAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTGCCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGaa                                                                  <  5:202175/149‑1 (MQ=255)                                                                                   gcAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGaaa                                                                 >  1:265922/1‑149 (MQ=255)                                                                                              cAGCGCTGGATGGCATCGGTGGCATCGCCACCAATTACGCGTGCGCGACCGATGTGCTGCGCTACCGTATGCTTCACCAAGAGGGTGGGCTTTACATTGACGTGGACGACTTCCTCCTGCCGGACGGCAAGGGCGAAACGATCGATCa                                                       <  2:222534/148‑1 (MQ=255)                                                                                                gcgcTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGctgcgcgtaatagcggctctggcagaaggcccggaagaagccttgctcttcaagcggcaatacctgcagccctggggcccgggctgccaatagcc                                                    >  5:258070‑M2/1‑54 (MQ=255)                                                                                                   cTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGa                                                 <  2:233761/149‑1 (MQ=255)                                                                                                    tGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAAcgat                                                             >  7:157909/1‑136 (MQ=255)                                                                                                    tGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAAcgat                                                             <  8:157909/136‑1 (MQ=255)                                                                                                         ggCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTgcg                                           >  2:520/1‑149 (MQ=255)                                                                                                           cAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGca                                         <  8:258576/149‑1 (MQ=255)                                                                                                           cAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGca                                         >  2:292996/1‑149 (MQ=255)                                                                                                            aaCGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGcac                                        <  6:216377/149‑1 (MQ=255)                                                                                                            aaCGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGcac                                        >  3:92149/1‑149 (MQ=255)                                                                                                            aaCGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGcac                                        <  1:292996/149‑1 (MQ=255)                                                                                                                             caATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGcaccccacc                                  >  7:209954/1‑138 (MQ=255)                                                                                                                             caATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGcaccccacc                                  <  8:209954/138‑1 (MQ=255)                                                                                                                              aaTTACGCGTCTGCGACCGATGTGctgcgcgtaatagcggctctggcagaaggcccggaagaagccttgctcttcaagcggcaatacctgcagccctggggcccgggctgccaatagccttgcgttctgttcgtaagcggtaggcgaag                      >  8:87097‑M2/1‑24 (MQ=255)                                                                                                                                ttACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGATTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGCACCCCACCCGATGGgctgctgc                    <  2:153324/149‑1 (MQ=255)                                                                                                                                  aCGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGGCGAGCTGCGCACCCCACCCGATGGgctgctgct                   <  7:179330/148‑1 (MQ=255)                                                                                                                                    gcgTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGCACCCCACCCGATGGGCtgctgctgc                 >  5:20351/1‑148 (MQ=255)                                                                                                                                            gACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCAGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGCACCCCACCCGATGGGCTGCTGCTGCCACCGCCGa        >  8:161936/1‑149 (MQ=255)                                                                                                                                             aCCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGCACCCCACCCGATGGGCTGCTGCTGCCACCGCCGAt       >  3:267349/1‑149 (MQ=255)                                                                                                                                                   gtgCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGCACCCCACCCGATGGGCTGCTGCTGCCACCGCCGATGTCCa  <  4:92149/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  CAGCCCGGGCCCCAGGGCTGCAGGTATTGCCGCTTGAAGAGCAAGGCTTCTTCCGGGCCTTCTGCCAGAGCCGCTATTACGCGCAGTACGAGGCAGCGCTGGATGGCAACGGTGGCATCGCCACCAATTACGCGTCTGCGACCGATGTGCTGCGCTACCGGATGCTGCACCATGAGGGTGGGCTGTACATGGACGTGGACGACTTCCTGCTGCCGGACGGCAAGGGCGAAACGATCGATCAGGTCGAGCTGCGCACCCCACCCGATGGGCTGCTGCTGCCACCGCCGATGTCCA  >  NC_002947/4921579‑4921872

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.