New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5040496	59 (1.210)	4 (0.090)	3/244	NT	6.7%	coding (8/1122 nt)	PP_4446	group II intron‑encoding maturase
	?	NC_002947	= 5040543	57 (1.250)					intergenic (‑40/‑81)	PP_4446/PP_5680	group II intron‑encoding maturase/Cro/CI family transcriptional regulator

CTGTACGATCTTGTCCTCCAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGACCGCAAGCACCTCTACAAGCTCGAAGCCGGT  >  NC_002947/5040402‑5040689                                                                                                                                              |                                                                                                                                                   ctgTACGATCTTGTCCTCCAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGatcggg                                                                                                                                              >  8:155308‑M2/1‑142 (MQ=255) ctgTACGATCTTGTCCTCCAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGatcggg                                                                                                                                              >  4:155030‑M2/1‑142 (MQ=255)    tACGATCTTGTCCTCCAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAAt                                                                                                                                          >  4:40605/1‑149 (MQ=255)     aCGATCTTGTCCTCCAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAAtt                                                                                                                                         >  3:41315/1‑149 (MQ=255)       gATCTTGTCCTCCAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATtgc                                                                                                                                       >  7:4380/1‑149 (MQ=255)       gATCTTGTCCTCCAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATtgc                                                                                                                                       >  4:217523/1‑149 (MQ=255)             gTCCTCCAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATtgct                                                                                                                                      <  1:81669/144‑1 (MQ=255)             gTCCTCCAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCg                                                                                                                                  >  1:131899/1‑148 (MQ=255)               cctccAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCAt                                                                                                                               >  2:185824/1‑149 (MQ=255)                 tccAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCAt                                                                                                                               >  1:168024/1‑147 (MQ=255)                   cAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGt                                                                                                                           <  4:57306/149‑1 (MQ=255)                   cAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGt                                                                                                                           >  6:158205/1‑149 (MQ=255)                     gagagGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTgg                                                                                                                         >  1:47563/1‑149 (MQ=255)                      agagGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTggg                                                                                                                        <  5:158205/149‑1 (MQ=255)                      agagGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTggg                                                                                                                        <  5:135323/149‑1 (MQ=255)                      agagGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTggg                                                                                                                        <  8:234158/149‑1 (MQ=255)                        agGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGt                                                                                                                      >  2:228012/1‑149 (MQ=255)                        agGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGt                                                                                                                      <  2:285177/149‑1 (MQ=255)                          gCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGatcgg                                                                                                                                               >  4:200108‑M2/1‑117 (MQ=255)                          gCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGatcgg                                                                                                                                               <  3:200108‑M2/122‑6 (MQ=255)                            aaTGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGc                                                                                                                    >  3:162200/1‑147 (MQ=255)                                 ccAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTg                                                                                                             <  3:217523/149‑1 (MQ=255)                                  cAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGa                                                                                                            <  3:40605/149‑1 (MQ=255)                                   aGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGAc                                                                                                           >  4:282797/1‑149 (MQ=255)                                       gACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTAc                                                                                                       <  8:4380/149‑1 (MQ=255)                                            tgcctgccGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAg                                                                                                  >  7:205446/1‑149 (MQ=255)                                              cctgccGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGt                                                                                                <  7:262331/149‑1 (MQ=255)                                                       ggCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGcc                                                                                       <  1:228012/149‑1 (MQ=255)                                                          tttGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTggg                                                                                                                        <  2:105654/113‑1 (MQ=255)                                                          tttGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGa                                                                                    >  4:72653/1‑149 (MQ=255)                                                          tttGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGa                                                                                    <  6:267125/149‑1 (MQ=255)                                                            tGGGACTGTAGACCCGCCGCGATGGCGTTGCCCTATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGa                                                                                    <  6:290576/147‑1 (MQ=255)                                                            tGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGa                                                                                    <  2:47563/147‑1 (MQ=255)                                                            tGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGAc                                                                                   <  6:139212/148‑1 (MQ=255)                                                             gggAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGt                                                                                                <  2:203880/134‑1 (MQ=255)                                                             gggAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGt                                                                                                >  1:203880/1‑134 (MQ=255)                                                             gggAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGc                                                                                 >  4:127315/1‑149 (MQ=255)                                                                       aCCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACACGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTcc                                                                         >  8:137425/1‑147 (MQ=255)                                                                         ccgccgCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGc                                                                     >  5:38248/1‑149 (MQ=255)                                                                          cgccgcGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCg                                                                    <  3:72653/149‑1 (MQ=255)                                                                             cgcgATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTg                                                                 <  2:131899/149‑1 (MQ=255)                                                                                     cGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGgtgt                                                         >  7:57386/1‑149 (MQ=255)                                                                                     cGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGgtgt                                                         <  6:190589/149‑1 (MQ=255)                                                                                       ttGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGa                                                       <  1:185510/149‑1 (MQ=255)                                                                                          cccGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGcc                                                    <  3:282797/149‑1 (MQ=255)                                                                                           tcgGTATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCTGGCCAGTGAGatcgggcaacgccatcgcggcgggtctacattcccaaagccgacggcaggcagcgtccgctgggcattgcctctcttgaggacaagatcgtacag                                                     <  6:8621‑M2/146‑96 (MQ=255)                                                                                             gATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGatcgggcaacgccatcgcggcgggtctacattcccaaa                                                                                                              <  8:256563‑M2/88‑39 (MQ=255)                                                                                             gATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGatcgggcaacgccatcgcggcgggtctacattcccaaa                                                                                                              >  7:256563‑M2/1‑50 (MQ=255)                                                                                             gATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATTAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAgg                                                 <  4:41315/149‑1 (MQ=255)                                                                                                atCTCAAAGATGTGCTGACGGGGCTGCCGACTCAGGGGGCCAGTGAGatcgggctacgccatctcggcgggtctacattcccaaagccgacggcaggcagcttccggtgggcattgcctctctggaggacaagatcgtacagcaggca                                               >  5:8621‑M2/1‑47 (MQ=255)                                                                                                    cAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCAt                                                                                                                               <  4:96340/64‑1 (MQ=255)                                                                                                    cAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCAt                                                                                                                               >  3:96340/1‑64 (MQ=255)                                                                                                     ataGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGt                                           <  6:289448/145‑1 (MQ=255)                                                                                                     aaaGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGt                                           <  3:127315/147‑1 (MQ=255)                                                                                                     aaaGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTg                                         >  3:130954/1‑149 (MQ=255)                                                                                                        gATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCt                                      <  6:38248/149‑1 (MQ=255)                                                                                                               tGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGAcc                               >  1:266059/1‑149 (MQ=255)                                                                                                                 aCGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGAcc                               <  8:57386/147‑1 (MQ=255)                                                                                                                    cgGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGACCGCAAg                          >  6:77630/1‑149 (MQ=255)                                                                                                                       cTGCCGAGGCAGCGGGCCAGTGATATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGACCGCAAGCAc                       <  1:185824/149‑1 (MQ=255)                                                                                                                       cTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGACCGCAAGCAc                       <  7:137425/149‑1 (MQ=255)                                                                                                                          ccGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGACCGCAAGCACctc                    <  8:205446/149‑1 (MQ=255)                                                                                                                           cGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGACCGCAAGCACctc                    >  4:246713/1‑148 (MQ=255)                                                                                                                               gCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGACCGCAAGCAc                       >  4:206388/1‑141 (MQ=255)                                                                                                                               gCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGACCGCAAGCAc                       <  3:206388/141‑1 (MQ=255)                                                                                                                                 aGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCCGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGCGTTGCCTGCAGACCCCAAGCACCGCTACCAGc             >  7:281897/1‑149 (MQ=25)                                                                                                                                 aGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAgg                                                                                                 >  4:283367/1‑65 (MQ=255)                                                                                                                                 aGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAgg                                                                                                 <  3:283367/65‑1 (MQ=255)                                                                                                                                       ccAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGACCGCAAGCACCTCTACAAGCTCGAAg       <  4:162200/149‑1 (MQ=255)                                                                                                                                        cAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGACCGCAAGCACCTCTACAAGCTCGAAGc      >  5:20728/1‑149 (MQ=255)                                                                                                                                            gagaTCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGACCGCAAGCACCTCTACAAGCTCGAAGCCGGt  >  2:150624/1‑149 (MQ=255)                                                                                                                                              gaTCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGa                                                       <  4:18558/94‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                   CTGTACGATCTTGTCCTCCAGAGAGGCAATGCCCAGCGGACGCTGCCTGCCGTCGGCTTTGGGAATGTAGACCCGCCGCGATGGCGTTGCCCGATATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCCAGTGAGATCGGGCAATTGCTGCCGCATCAGTGGGGTGCCAGCCTGACTTACGCAAGGTGAGTTCGCCGGACGCTTACCTCCGAGCGGTGAAGGGTGTGAGCCAGGCGGAGTTGCCTGCAGACCGCAAGCACCTCTACAAGCTCGAAGCCGGT  >  NC_002947/5040402‑5040689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.