| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5201579 = | 37 (0.760) | 4 (0.110) | 4/188 | NT | 18.4% | intergenic (‑65/‑115) | PP_4582/PP_4583 | membrane protein/putative Peptidase |
| ? | NC_002947 | 5201674 = | 9 (0.260) | intergenic (‑160/‑20) | PP_4582/PP_4583 | membrane protein/putative Peptidase | |||||
GATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAAGC > NC_002947/5201540‑5201821 | gaTGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGAc > 1:223645/1‑149 (MQ=255) gcAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACTCCAATCAAGAGACCTTGAATGCCAACCAAGCCCCCAcccc > 7:70437/1‑149 (MQ=38) tttGCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCaa > 6:153159/1‑149 (MQ=255) GC‑GGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTACAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCg < 2:87882‑M1/149‑1 (MQ=255) GGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTa < 5:194514‑M1/149‑1 (MQ=255) GGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACACCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGt < 6:261618‑M1/148‑1 (MQ=255) GGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTAt > 5:153159‑M1/1‑149 (MQ=255) gtaaacccgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCCACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATg > 5:210135‑M2/72‑149 (MQ=255) ACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCACCCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTg < 7:231458‑M1/149‑1 (MQ=255) ACCCGCTCCTACCTCGGGGCGAGCCCGGGTGCCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTg > 8:70437‑M1/1‑149 (MQ=255) cccgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAAt > 7:270927‑M2/67‑88 (MQ=255) cccgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAAt < 8:270927‑M2/22‑1 (MQ=255) cgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCt > 2:95892‑M2/65‑149 (MQ=255) cTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑gcg > 6:70603/1‑149 (MQ=255) tCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑gcgc > 3:154779/1‑149 (MQ=255) ggggCGATCCCTGTTGGCGCGGTTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGa < 6:194514/146‑1 (MQ=255) ggTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑gcgc < 8:231458/147‑1 (MQ=255) gCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGaccc > 5:266063/1‑147 (MQ=255) aTCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGACAcccc < 4:154779/149‑1 (MQ=255) ggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGACACCCCCGAGGTACt < 6:210135‑M2/112‑1 (MQ=255) gagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCACGCCCCAACCCCCGATTGCCCACGCCGACCCGG‑CCCCCGGCCCGTATGCCTGGCTGCCACA‑GCGCGACACCCCCGAGGTACTc > 4:280009‑M2/37‑149 (MQ=255) gagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGACACCCCCGAGGTACt < 5:261618‑M2/112‑1 (MQ=255) cccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCCTCCGACCCGTATGCCTGGCTGCAACA‑GCGCGACACCCCCGAGGTACTCGCTTACCTGc < 1:87882‑M2/124‑1 (MQ=255) ccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGACACCCCCGAgg > 7:151699‑M2/25‑132 (MQ=255) ccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGACACCCCCGAgg < 8:151699‑M2/108‑1 (MQ=255) aagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGa < 5:70603‑M2/130‑1 (MQ=255) agagGCCTGCACACGCAACTCCAATCAAGAGACCTTCAATGCCACCAAACCCCCAACCCCCCAATGCCCAACCCCACCAGG‑CCACCGACCCGTATGACTGGCAGCAACA‑GCGAGACACCCCCGACGAACTCGCATCCCTGCAAGCTGa > 8:156658/1‑148 (MQ=255) gctggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACg > 5:264944‑M2/15‑149 (MQ=255) gccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTCCAACA‑GCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACg > 2:92085‑M2/15‑149 (MQ=255) acaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTAc > 4:131365‑M2/9‑148 (MQ=255) caggaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAg < 1:263755‑M2/143‑1 (MQ=255) gcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAgg > 6:145024‑M2/5‑148 (MQ=255) aaCTCCATTCAACCAACCTTCAATCCCAACCAAGCCCAAACCCCCGTTTCCCAAAGCGTACAAGG‑CAACCTACCCTTATCCCTGGCTG‑AACACGCGCTAC‑CCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAAgc < 5:219436/149‑1 (MQ=255) | GATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGG‑CCACCGACCCGTATGCCTGGCTGCAACA‑GCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAAGC > NC_002947/5201540‑5201821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |