New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5978361	52 (1.060)	5 (0.110)	5/250	NT	8.5%	coding (756/993 nt)	PP_5241	LuxR family transcriptional regulator
	?	NC_002947	= 5978393	58 (1.240)					coding (724/993 nt)	PP_5241	LuxR family transcriptional regulator

GTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGC  >  NC_002947/5978251‑5978541                                                                                                                                               |                                                                                                                                                     gTGCCGATCTGCCTGGCTATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGggcgc                                                                                                                                                 >  4:49327‑M2/1‑143 (MQ=255)    ccGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCAc                                                                                                                                             >  1:119531/1‑149 (MQ=255)            gatGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGTTACTTTTCCTCTACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTg                                                                                                                                       <  8:231812/145‑1 (MQ=255)            ccTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACt                                                                                                                                            <  7:253761/142‑1 (MQ=255)            ccTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACt                                                                                                                                            <  1:196568/142‑1 (MQ=255)            ccTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACt                                                                                                                                            <  7:229681/142‑1 (MQ=255)            ccTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTc                                                                                                                                         <  1:33073/145‑1 (MQ=255)             cTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCaa                                                                                                                                    >  1:300753/1‑149 (MQ=255)              tGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTCAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCaa                                                                                                                                    >  8:40915/1‑148 (MQ=255)                gCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGc                                                                                                                                      <  8:85053/144‑1 (MQ=255)                gCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGc                                                                                                                                      >  7:85053/1‑144 (MQ=255)                  gATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAggg                                                                                                                               >  2:180851/1‑149 (MQ=255)                  gATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAggg                                                                                                                               >  8:277053/1‑149 (MQ=255)                   aTCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGt                                                                                                                              >  2:47662/1‑149 (MQ=255)                     cTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGt                                                                                                                              >  5:155769/1‑147 (MQ=255)                       gCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACa                                                                                                                                  <  4:73466/141‑1 (MQ=255)                       gCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACa                                                                                                                                  >  3:73466/1‑141 (MQ=255)                        cTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGc                                                                                                                          <  4:6854/148‑1 (MQ=255)                                  aaGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTc                                                                                                               <  3:82087/149‑1 (MQ=255)                                    gccgccTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACa                                                                                                                                  <  6:211473/128‑1 (MQ=255)                                    gccgccTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACa                                                                                                                                  >  5:211473/1‑128 (MQ=255)                                    gccgccTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCAt                                                                                                             <  1:47662/149‑1 (MQ=255)                                      cgccTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCAt                                                                                                             <  6:24556/147‑1 (MQ=255)                                      cgccTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCAt                                                                                                             >  5:24556/1‑147 (MQ=255)                                        ccTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGaa                                                                                                         >  1:35334/1‑149 (MQ=255)                                             caccaGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCt                                                                                                    >  1:300858/1‑149 (MQ=255)                                              accaGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCtt                                                                                                   >  6:208701/1‑149 (MQ=255)                                               ccaGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTg                                                                                                  <  2:146508/149‑1 (MQ=255)                                                 aGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGt                                                                                                <  5:120485/149‑1 (MQ=255)                                                      gaagaCCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGa                                                                                            >  3:130866/1‑148 (MQ=255)                                                               gcgcTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCAc                                                                                    <  2:119531/147‑1 (MQ=255)                                                                       gCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCTCCCCGgcg                                                                          <  4:130866/149‑1 (MQ=255)                                                                               aGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGc                                                                  <  2:300753/149‑1 (MQ=255)                                                                                   gcTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTg                                                               >  7:192683/1‑148 (MQ=255)                                                                                    cTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGa                                                             <  6:235221/149‑1 (MQ=255)                                                                                       gTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTATGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACgg                                                          >  8:169599/1‑149 (MQ=255)                                                                                            tttCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATc                                                     >  1:300938/1‑149 (MQ=255)                                                                                               ccTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCgg                                                   <  7:169599/148‑1 (MQ=255)                                                                                                cTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGggcgcggcaggtcgaggaaaagtaccagcgcctgactcagcgtgagcgccaggtcttctcgctggtggtaggcggcttgtcgcacaagcagatcgccagg                                                  <  5:106973‑M2/148‑101 (MQ=255)                                                                                                 tCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGAt                                                >  6:79669/1‑149 (MQ=255)                                                                                                    aCCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGt                                             <  2:300938/149‑1 (MQ=255)                                                                                                    aCCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGt                                             <  6:155769/149‑1 (MQ=255)                                                                                                     ccTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGggcgcggcaggtcgaggaaaagtaccagcgcctgactcagcgtgagcgccaggtcttctcgctggtggtaggcggcttgtcgcacaagcagatcgccagg                                                  <  1:295797‑M2/143‑101 (MQ=255)                                                                                                      cTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGggcgcggcaggtcgaggaaaagtaccagcgcctgactcagcgtgagcgccaggtcttctcgctggtggtaggcggcttgtcgcacaagcagatcgccagg                                                  <  6:94433‑M2/142‑101 (MQ=255)                                                                                                      cTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGc                                           <  2:300858/149‑1 (MQ=255)                                                                                                         ccGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGggcgcggcaggtcgaggaaaagtaccagcgcctgactcagcgtgagcgccaggtcttctcgctggtggtaggcggcttgtcgcacaagcagatctccaggcagatcggca                                        <  8:180121‑M2/149‑111 (MQ=255)                                                                                                           gcgcCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGaaa                                      >  6:155778/1‑149 (MQ=255)                                                                                                            cgcCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAAc                                     <  1:180851/149‑1 (MQ=255)                                                                                                             gcCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAAc                                     >  5:223181/1‑148 (MQ=255)                                                                                                              ccTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGTTCTTCATCGTACGTCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCa                                   <  7:40915/149‑1 (MQ=255)                                                                                                                 gCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGt                                 >  4:12278/1‑148 (MQ=255)                                                                                                                  cAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGa                                                             <  4:259218/119‑1 (MQ=255)                                                                                                                  cAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGa                                                             >  3:259218/1‑119 (MQ=255)                                                                                                                  cAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTc                                <  3:12278/148‑1 (MQ=255)                                                                                                                   aGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCAt                              <  2:35334/149‑1 (MQ=255)                                                                                                                   aGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCAt                              <  7:277053/149‑1 (MQ=255)                                                                                                                       aCTTGTGTCCTTCGGCCACGGCCCGGGCGCGCACTTTCTGCAACAGGGTCAGCAATTTGTCTTCATCGAACGGCTTTGTCAGAAATTCCACCGCCCCGGCGCTCATGGACTGGACTGTCATCGGGATTGTGCCGAAACCAGTCATGAac                          <  6:289102/149‑1 (MQ=255)                                                                                                                       aCTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAac                          >  5:44381/1‑149 (MQ=255)                                                                                                                        cTTGTGGCCTTCGGCCACGGCCCGggcgcggcaggtcgaggaaaagtaccagcgcctgactcagcgtgagcgccaggtcttctcgctggtggtaggcggcttgtcgcacaagcagatcgccaggcagatcggcaccagcgaggtgacga                         >  6:106973‑M2/1‑24 (MQ=255)                                                                                                                        cTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAaca                         <  5:155778/149‑1 (MQ=255)                                                                                                                         ttGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAacac                        >  1:158492/1‑149 (MQ=255)                                                                                                                           gtgGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCa                               <  7:38840/140‑1 (MQ=255)                                                                                                                           gtgGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCa                               >  8:38840/1‑140 (MQ=255)                                                                                                                           gtgGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGa                      >  5:92846/1‑149 (MQ=255)                                                                                                                              gCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATc                    <  6:92846/148‑1 (MQ=255)                                                                                                                              gCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCg                   >  3:290668/1‑149 (MQ=255)                                                                                                                                cTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGc                 >  6:181269/1‑149 (MQ=255)                                                                                                                                         cGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAgc        <  5:208701/149‑1 (MQ=255)                                                                                                                                              cGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAg   <  5:181269/149‑1 (MQ=255)                                                                                                                                               gggCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGc  >  2:21644/1‑149 (MQ=255)                                                                                                                                               |                                                                                                                                                     GTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGC  >  NC_002947/5978251‑5978541

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.