New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 11719	54 (0.950)	5 (0.090)	3/246	NT	9.2%	coding (617/1104 nt)	dnaN	DNA polymerase III subunit beta
	?	NC_002947	= 11774	48 (0.900)					coding (672/1104 nt)	dnaN	DNA polymerase III subunit beta

AACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/11568‑11719 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcgGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAACTCCAGGATACCTTTACGCGGCACGATGACCTGGTGTCGATCCTCCTGCTCGATCGGCGCGCTCATCGAGCAAAGCGCCAGGC  <  NC_002947/11774‑11629                                                                                                                                                                                                                                                                                                            AACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTG                                                                                                                                                         <  7:215767/147‑1  ACGGCATGCTGCTTGAGGTTTCCCGCAAGACATTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCG                                                                                                                                                      >  1:205626/1‑149  ACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCG                                                                                                                                                      >  8:153304/1‑149                                        GCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGCCACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGGATGTGATGCTGGCCCAGCACGATGCTGCCCATACC                                                                                                                >  5:294651/1‑149                                        GCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACC                                                                                                                >  7:308646/1‑149                                                                    aGCTTTGCTCGAGGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAAC                                                                                    <  6:294651/148‑1                                                                    CGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAAC                                                                                    <  8:308646/149‑1                                                                         TGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAACTCCA                                                                                <  8:96670/148‑1                                                                                                                                                  TGGCGCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAACTCCAGGATACCTTTACGCGGCACGATGACCTGGTGTCGATCCTCCTGCTCGATCGGCGCGCTCATCGAGCAAAGCGC       >  7:153304/1‑148                                                                                                                                                      GCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAACTCCAGGATACCTTTACGCGGCACGATGACCTGGTGTCGATCCTCCTGCTCGATCGGCGCGCTCATCGAGCAAAGCGCCAGGC  >  2:106993/1‑149                                                                                                                                                                                                                                                                                                            AACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/11568‑11719 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcgGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAACTCCAGGATACCTTTACGCGGCACGATGACCTGGTGTCGATCCTCCTGCTCGATCGGCGCGCTCATCGAGCAAAGCGCCAGGC  <  NC_002947/11774‑11629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.