New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 144237	43 (0.760)	3 (0.060)	3/242	NT	6.5%	intergenic (+216/‑530)	PP_0136/gltP	hypothetical protein/glutamate/aspartate‑proton DAACS transporter
	?	NC_002947	= 144275	46 (0.870)					intergenic (+254/‑492)	PP_0136/gltP	hypothetical protein/glutamate/aspartate‑proton DAACS transporter

TATAGTTCAGCCTTCTATGATGCGCCGCCCCGAGGAGGGGTAGCACATGACCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/144084‑144237 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggaagtcAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGTAACAATCAGAGCAGCCCGACCCCTTGGTCATG  <  NC_002947/144275‑144129                                                                                                                                                                                                                                                                                                               TATAGTTCAGCCTTCTATGATGCGCCGCCCCGAGGAGGGGTAGCACATGACCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCG                                                                                                                                                           >  7:81806/1‑148   TAGTTCAGCCTTCTATGATGCGCCGCCCCGAGGAGGGGTAGCACATGACCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAA                                                                                                                                                        <  7:104352/149‑1     GTTCAGCCTTCTATGATGCGCCGCCCCGAGGAGGGGTAGCACATGACCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAAG                                                                                                                                                       <  5:995/148‑1      TTCAGCCTTCTATGATGCGCCGCCCCGAGGAGGGGTAGCACATGACCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCTGAAGT                                                                                                                                                      >  6:158445/1‑148                                                  ACCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAAGTCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTT                                                                                                          <  2:111607/148‑1                                                   CCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAAGTCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCC                                                                                                        <  4:294490/149‑1                                                   CCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGGAGTGGCCTAGGGGTACAGCGAGTGCCTCCAGTAATGGGCCGGGTCAGGACAGGCGGAATCGGAAGTCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTC                                                                                                         <  1:249757/148‑1                                                                                                                                                  TCGGAAGTCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGTAACAATCAGAGCAGCCCGACCCC           >  4:319545/1‑147                                                                                                                                                    GGAAGTCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGTAACAATCAGAGCAGCCCGACCCCTTGG       <  6:59269/149‑1                                                                                                                                                         TCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGTAACAATCAGAGCAGCCCGACCCCTTGG       <  5:341229/144‑1                                                                                                                                                         TCAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCAGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGCCCACTCAGGTCCTGTAACAATCAGATCACCCCGACCCCTTGGTCATG  >  3:256909/1‑149                                                                                                                                                         TCAGGTCTGGCAAGGTATCCCTGTGAAACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGTAACAATCAGAGCAGCCCGACCCCTTGG       >  6:341229/1‑144                                                                                                                                                          CAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGT                                  <  3:262014/116‑1                                                                                                                                                          CAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGT                                  >  4:262014/1‑116                                                                                                                                                          CAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCG                                         >  3:327724/1‑109                                                                                                                                                          CAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCG                                         <  4:327724/109‑1                                                                                                                                                                                                                                                                                                               TATAGTTCAGCCTTCTATGATGCGCCGCCCCGAGGAGGGGTAGCACATGACCAAGGGGTCGGGCTGCTCTGATTGTTACAGGACCGGAGTGGCCTAGGGGTACAGGGAGTGCCTCCAGTAATGGGCCGGGTCAGGAAAGGCGGAATCGGAAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/144084‑144237 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggaagtcAGGTCTGGCAAGGTATCCCTGTGACACCGCCGACCTGAGACTTCCGATTCCGCCTTTCCTGACCCGGCCCATTACTGGAGGCACTCCCTGTACCCCTAGGCCACTCCGGTCCTGTAACAATCAGAGCAGCCCGACCCCTTGGTCATG  <  NC_002947/144275‑144129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.