New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 240218	48 (0.850)	3 (0.060)	3/246	NT	6.3%	coding (513/1128 nt)	PP_0188	uroporphyrin‑III C‑methyltransferase
	?	NC_002947	= 240254	44 (0.820)					coding (549/1128 nt)	PP_0188	uroporphyrin‑III C‑methyltransferase

GACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/240066‑240218 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaggcACCCGGGTCGCTCTGCTCGCGCAGGATCTCGTCGGCGCCTTCGACCAGGGCTTTGGCACTGGTGATGTCCTGCAACGCCGAAAGGCGCAGGGTAGCCAGCCGCAGGAGGTGCTCGGCTTCGGCCAGGCGCCACTCTTTGCGGC  <  NC_002947/240254‑240112                                                                                                                                                                                                                                                                                                          GACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCG                                                                                                                                                      >  6:157742/1‑148   CCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAG                                                                                                                                                   >  1:136174/1‑149    CAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGG                                                                                                                                                  >  3:172459/1‑149                                               GCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGACTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCACCCGGGTCGCTCTGCTCGCGCAGGATCTCGTCGGCGCCTTC                                                                                                       <  1:223812/149‑1                                                                            GAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCACCCGGGTCGCTCTGCTCGCGCAGGATCTCGTCGGCGCCTT                                                                                                        >  3:129573/1‑119                                                                            GAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCACCCGGGTCGCTCTGCTCGCGCAGGATCTCGTCGGCGCCTT                                                                                                        <  4:129573/119‑1                                                                                                                                                    GAAGGCACCCGGGTCGCTCTGCTCGCGCAGGATCTCGTCGGCGCCTTCGACCAGGGCTTTGGCACTGGTGATGTCCTGCAACGCCGAAAGGCGCAGGGTAGCCAGCCGCAGGAGGTGCTCGGCTTCGGCCAGGCGCCACTCTTTGCGGC  <  7:155801/149‑1                                                                                                                                                                                                                                                                                                          GACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/240066‑240218 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaggcACCCGGGTCGCTCTGCTCGCGCAGGATCTCGTCGGCGCCTTCGACCAGGGCTTTGGCACTGGTGATGTCCTGCAACGCCGAAAGGCGCAGGGTAGCCAGCCGCAGGAGGTGCTCGGCTTCGGCCAGGCGCCACTCTTTGCGGC  <  NC_002947/240254‑240112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.