New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 240218 | 48 (0.850) | 3 (0.060) | 3/246 | NT | 6.3% | coding (513/1128 nt) | PP_0188 | uroporphyrin‑III C‑methyltransferase |
? | NC_002947 | = 240254 | 44 (0.820) | coding (549/1128 nt) | PP_0188 | uroporphyrin‑III C‑methyltransferase |
GCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGTTCTTGAAACTGGCTGCGCAGCGTGAGCTG > NC_002947/240071‑240362 | gcagcGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGgcg > 8:291445/1‑149 (MQ=255) cagcGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGgcgc > 5:202004/1‑149 (MQ=255) agccagcGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACgaga < 1:155067/148‑1 (MQ=255) gccagcGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATc > 8:41177/1‑149 (MQ=255) gcgcCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTgc < 2:257753/149‑1 (MQ=255) gcCTGGAACACGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGACGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTgcgc < 6:265008/149‑1 (MQ=255) cTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGa < 6:292550/149‑1 (MQ=255) cGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCg > 7:90935/1‑149 (MQ=255) gggAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCaga > 8:15960/1‑140 (MQ=255) gggAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCaga < 7:15960/140‑1 (MQ=255) ggtgaAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCgg < 2:136174/145‑1 (MQ=255) ggAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCgg < 7:41177/148‑1 (MQ=255) gagaAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGt < 7:214739/149‑1 (MQ=255) gCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTgccttc < 7:155801‑M2/149‑7 (MQ=255) gCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGACTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCacccgggtcgctctgctcgcgcaggatctcgtcggcgccttc < 1:223812‑M1/149‑43 (MQ=255) gCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCagag < 5:214921/130‑1 (MQ=255) gCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTcgcc < 2:266069/149‑1 (MQ=255) gCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTACTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCagag > 6:214921/1‑130 (MQ=255) tGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGccgcccgc > 6:196894/1‑147 (MQ=255) gcgcCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATc > 6:50159/1‑106 (MQ=255) gcgcCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATc < 5:50159/106‑1 (MQ=255) gcgcCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCaga < 5:203756/119‑1 (MQ=255) gcgcCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCaga > 6:203756/1‑119 (MQ=255) gcCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCaa > 6:90909/1‑149 (MQ=255) gcCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCa > 3:288177/1‑148 (MQ=255) ggCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTgg > 4:247776/1‑149 (MQ=255) gCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTg < 8:155801/147‑1 (MQ=255) cGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGcc > 6:298962/1‑149 (MQ=255) gAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCacccgggtcgctctgctcgcgcaggatctcgtcggcgcctt > 3:129573‑M1/1‑78 (MQ=255) gAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCacccgggtcgctctgctcgcgcaggatctcgtcggcgcctt < 4:129573‑M1/119‑42 (MQ=255) ctcctGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGTCCATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCa < 1:119972/149‑1 (MQ=255) ctGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACg < 5:196894/147‑1 (MQ=255) ctGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGGCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGc < 8:90935/148‑1 (MQ=255) ggctggctACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAAc < 3:302597/149‑1 (MQ=255) gctggctACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACa < 7:291445/149‑1 (MQ=255) gctACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCAc < 5:157742/149‑1 (MQ=255) cccTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCa < 8:265612/148‑1 (MQ=255) cccTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAg > 6:15946/1‑149 (MQ=255) cccTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAg > 8:132415/1‑149 (MQ=255) tttCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGAc > 8:248595/1‑149 (MQ=255) gCGTTGAAGG‑ACATCACCAGTGCCAAAGCCCTGGTCCAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGCTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTa > 8:306853/1‑148 (MQ=255) cAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCt < 4:288177/149‑1 (MQ=255) cAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCt > 7:273444/1‑149 (MQ=255) cATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGTTCt < 3:247776/149‑1 (MQ=255) aTCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGTTCtt < 5:90909/149‑1 (MQ=255) aTCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGTTCtt < 8:273444/149‑1 (MQ=255) cACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGTTCTTg < 7:140804/148‑1 (MQ=255) cACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGAAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGTTCTTg > 8:140804/1‑148 (MQ=255) aCCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGTTCTTGa < 5:15946/148‑1 (MQ=255) ccAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGTTCTTGaaa < 7:248595/149‑1 (MQ=255) cAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGt < 3:197354/140‑1 (MQ=255) cAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGt > 4:197354/1‑140 (MQ=255) ccAAATCCCTTGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGAGCCCGGGGCCTTCGACTACCGCGAGCAACTGGCCCGCAGCCTGGCCACTCTCAACATCACTCAGCAACCGGACCGTACTGGCCTGTTCTTGAAACTGGc < 7:102583/148‑1 (MQ=255) ccAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGTTCTTGAAACTgg < 8:28388/147‑1 (MQ=255) gAAGGCacccgggtcgctctgctcgcgcaggatctcgtcggcgccttcgaccagggctttggcactggtgatgtcctgcaacgccgaaaggcgcagggtagccagccgcaggaggtgctcggcttcggccaggcgccactctttgcggc < 7:155801‑M1/149‑144 (MQ=255) gAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTgccttcgaccagggctttggcactggtgatgtcctgcaacgccgaaagtcgcagggtagccagccgcaggaggtgctcggcttcggccaggcgccactctttgcggc < 1:223812‑M2/149‑108 (MQ=255) aaGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTgccttcgaccagggctttggcactggtgatgtcctgcaacgccgaaaggcgcagggtagccagccgcaggaggtgctc > 3:129573‑M2/1‑41 (MQ=255) aaGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTgccttcgaccagggctttggcactggtgatgtcctgcaacgccgaaaggcgcagggtagccagccgcaggaggtgctc < 4:129573‑M2/119‑79 (MQ=255) aGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGTTCTTGAAACTGGCTGCGCAGCGTGAGCTg < 3:161448/148‑1 (MQ=255) aGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGTTCTTGAAACTGGCTGCGCAGCGTGAGCTg > 4:161448/1‑148 (MQ=255) | GCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGG‑ACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACAGCACTCAGCAACCGGACCGTACTGGCCTGTTCTTGAAACTGGCTGCGCAGCGTGAGCTG > NC_002947/240071‑240362 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |