New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 261742	59 (1.040)	4 (0.070)	3/248	NT	6.4%	coding (224/966 nt)	PP_0210	phycobiliprotein
	?	NC_002947	= 261793	60 (1.110)					coding (275/966 nt)	PP_0210	phycobiliprotein

GCGTGCGCCGCATCGCCCTGATCGAGCTGGCCGACCTGGAAGACCCG‑‑GA‑‑TGGCTTGCCTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/261589‑261742 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgcaGCGGCCAGGCGTACAGGCTCGGCGGCATCGGCCAGCGCAGCGCACAGGGCTTGCACAACTTCGGGTTCTTCCCAGGCCTCAAGCAGGCGCGCGGCCTCGGCACGCACCTCGGCGGCGGCGTCCGCCAGCAGGGCATCGGTGAGCCAAG  <  NC_002947/261793‑261646                                                                                                                                                                                                                                                                                                                    GCGTGCGCCGCATCGCCCTGATCGAGCTGGCCGACCTGGAAGACCCG‑‑GA‑‑TGGCTTGCCTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTT                                                                                                                                                           <  6:102229/149‑1    TGCGCCGCATCGCCCTGATCGAGCTGGCCGACCTGGAAGACCCG‑‑GA‑‑TGGCTTGCCTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTG                                                                                                                                                        <  8:325999/149‑1     ggGCCGCTTCGCCCTGTTCTAGCTGGCGGACGTGGATGACCCGTCGACCTAGCTTGCCTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTT                                                                                                                                                           <  1:302142/147‑1                                    CTGGAAGACCCG‑‑GA‑‑TGGCTTGCCTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAGCGGCCAGGCGTACAGGCTCGGCGGCATCG                                                                                                                        >  8:88952/1‑149                                                                          ATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAGCGGCCAGGCGTACAGGCTCGGCGGCATCGGCCAGCGCAGCGCACAGGGCTTGCACAACTTCGG                                                                                      <  7:88952/149‑1                                                                                     GCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAGCGGCCAGGCGTACAGGCTCGGCGGCATCGGCCAGCGCAGCGCACAGGGCTTGCACAACTTCGG                                                                                      >  3:95594/1‑138                                                                                     GCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAGCGGCCAGGCGTACAGGCTCGGCGGCATCGGCCAGCGCAGCGCACAGGGCTTGCACAACTTCGG                                                                                      <  4:95594/138‑1                                                                                                                                                         TGTGCAGCGGCCAGGCGTACAGGCTCGGCGGCATCGGCCAGCGCAGCGCACAGGGCTTGCACAACTTCGGGTTCTTCCCAGGCCTCAAGCAGGCGCGCGGCCTCGGCACGCACCTCGGCGGCGGCGTCCGCCAGCAGGGCATCGGT          <  8:309761/146‑1                                                                                                                                                           TGCAGCGGCCAGGCGTACAGGCTCGGCGGCATCGGCCAGCGCAGCGCACAGGGCTTGCACAACTTCGGGTTCTTCCCAGGCCTCAAGCAGGCGCGCGGCCTCGGCACGCACCTCGGCGGCGGCGTCCGCCAGCAGGGCATCGGTGA        <  1:156229/146‑1                                                                                                                                                              AGCGGCCAGGCGTACAGGCTCGGCGGCATCGGCCAGCGCAGCGCACAGGGCTTGCACAACTTCGGGTTCTTCCCAGGCCTCAAGCAGGCGCGCGGCCTCGGCACGCACCTCGGCGGCGGCGTCCGCCAGCAGGGCATCGGTGAGCCAAG  >  8:192557/1‑149                                                                                                                                                                                                                                                                                                                    GCGTGCGCCGCATCGCCCTGATCGAGCTGGCCGACCTGGAAGACCCG‑‑GA‑‑TGGCTTGCCTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/261589‑261742 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgcaGCGGCCAGGCGTACAGGCTCGGCGGCATCGGCCAGCGCAGCGCACAGGGCTTGCACAACTTCGGGTTCTTCCCAGGCCTCAAGCAGGCGCGCGGCCTCGGCACGCACCTCGGCGGCGGCGTCCGCCAGCAGGGCATCGGTGAGCCAAG  <  NC_002947/261793‑261646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.