New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 261742	59 (1.040)	4 (0.070)	3/248	NT	6.4%	coding (224/966 nt)	PP_0210	phycobiliprotein
	?	NC_002947	= 261793	60 (1.110)					coding (275/966 nt)	PP_0210	phycobiliprotein

GCCGCATCGCCCTGATCGAGCTGGCCGACCTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGCCGATGCCTTCGTCCGCGCCAGTGCCCTA  >  NC_002947/261595‑261890                                                                                                                                                     |                                                                                                                                                     gccgcATCGCCCTGATCGAGCTGGCCGACCTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCaa                                                                                                                                                     <  2:266290/149‑1 (MQ=255)  ccgcATCGCCCTGATCGAGCTGGCCGACCTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAg                                                                                                                                                    <  5:259023/149‑1 (MQ=255)   cgcATCGCCCTGATCGAGCTGGCCGACCTGGAAGACCCGGATGGCTTGC‑CTCGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGc                                                                                                                                                   >  6:210480/1‑149 (MQ=255)      aTCGCCCTGATCGAGCTGGCCGACCTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCt                                                                                                                                                <  8:23659/149‑1 (MQ=255)      aTCGCCCTGATCGAGCTGGCCGACCTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCt                                                                                                                                                <  7:305449/149‑1 (MQ=255)          cccTGATCGAGCTGGCCGACCTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGtgc                                                                                                                                            >  6:57287/1‑149 (MQ=255)                 cGAGCTGGCCGACCTGGAAGACCCGGATGGCTTGCGCTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGtgcgctgcg                                                                                                                                      >  1:236490/1‑149 (MQ=255)                  gAGCTGGCCGACCTGGAAGACCCGGATGGCGTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGtgcgctgcgc                                                                                                                                     <  2:111297/148‑1 (MQ=255)                       ggCCGACCTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGc                                                                                                                                 <  5:209334/147‑1 (MQ=255)                       ggCCGACCTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGc                                                                                                                                 >  6:209334/1‑147 (MQ=255)                        gCCGACCTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGTGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGcc                                                                                                                                <  6:342558/147‑1 (MQ=255)                        gCCGACCTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGa                                                                                                                              >  7:261219/1‑149 (MQ=255)                         cggACCTGGAAGCCCCGGTTGGCTTGC‑CGTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGATGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGAt                                                                                                                             <  4:9974/147‑1 (MQ=255)                         ccGACCTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGAt                                                                                                                             >  2:281929/1‑149 (MQ=255)                          cGACCTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATg                                                                                                                            >  1:319395/1‑149 (MQ=255)                              cTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAgcggccaggcgtacaggctcggcggcatcg                                                                                                                        >  8:88952‑M1/1‑119 (MQ=255)                               tGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGAt                                                                                                                             <  2:264991/143‑1 (MQ=255)                               tGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGAt                                                                                                                             >  1:264991/1‑143 (MQ=255)                                       ccGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTg                                                                                                                >  2:64265/1‑148 (MQ=255)                                         ggATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTAc                                                                                                             >  7:192557/1‑149 (MQ=255)                                                   c‑cTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCg                                                                                                    <  5:264984/148‑1 (MQ=255)                                                     cTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCt                                                                                                  >  8:192557‑M2/1‑148 (MQ=255)                                                           tCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCtgca                                                                                               <  1:156229‑M2/146‑5 (MQ=255)                                                            cACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCCGGCCGCTGCACaga                                                                                           <  7:309761/149‑1 (MQ=255)                                                             aCCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCtgcaca                                                                                             <  8:309761‑M2/146‑7 (MQ=255)                                                             aCCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACagag                                                                                          >  6:292567/1‑149 (MQ=255)                                                             aCCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACaga                                                                                           <  2:236490/148‑1 (MQ=255)                                                                 aTGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAgcggccaggcgtacaggctcggcggcatcggccagcgcagcgcacagggcttgcacaacttcgg                                                                                      <  7:88952‑M1/149‑65 (MQ=255)                                                                     ccTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGc                                                                                   >  8:338624/1‑148 (MQ=255)                                                                     ccTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGc                                                                                   >  3:349339/1‑148 (MQ=255)                                                                     ccTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGc                                                                                   >  4:138744/1‑148 (MQ=255)                                                                            gCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAgcggccaggcgtacaggctcggcggcatcggccagcgcagcgcacagggcttgcacaacttcgg                                                                                      >  3:95594‑M1/1‑74 (MQ=255)                                                                            gCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAgcggccaggcgtacaggctcggcggcatcggccagcgcagcgcacagggcttgcacaacttcgg                                                                                      <  4:95594‑M1/138‑65 (MQ=255)                                                                            gCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTaa                                                                           <  2:156229/149‑1 (MQ=255)                                                                            gCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTa                                                                            >  1:190308/1‑148 (MQ=255)                                                                            gCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTa                                                                            >  6:74421/1‑148 (MQ=255)                                                                             cGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTaaa                                                                          <  5:292567/149‑1 (MQ=255)                                                                                 cgccgccgcCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGcc                                                                      <  1:281929/149‑1 (MQ=255)                                                                                  gccgccgccGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCt                                                                     >  2:334569/1‑149 (MQ=255)                                                                                   ccgccgccgAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCtt                                                                    <  7:336683/149‑1 (MQ=255)                                                                                   ccgccgccgAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCtt                                                                    <  2:90170/149‑1 (MQ=255)                                                                                    cgccgccgAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCt                                                                     <  6:261987/147‑1 (MQ=255)                                                                                    cgccgccgAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCt                                                                     >  5:261987/1‑147 (MQ=255)                                                                                     gccgccgAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTg                                                                   >  8:48323/1‑148 (MQ=255)                                                                                        gccgAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGc                                                                       >  4:297075/1‑141 (MQ=255)                                                                                        gccgAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGc                                                                       <  3:297075/141‑1 (MQ=255)                                                                                          cgAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCg                                                             <  5:210480/149‑1 (MQ=255)                                                                                            aGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGc                                                           <  5:57287/149‑1 (MQ=255)                                                                                              gtgcgtgcCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCa                                                         <  4:349339/149‑1 (MQ=255)                                                                                                gcgtgcCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGc                                                       >  1:244654/1‑149 (MQ=255)                                                                                                 cgtgcCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGc                                                       <  8:261219/148‑1 (MQ=255)                                                                                                      cGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATcc                                                 <  2:319395/149‑1 (MQ=255)                                                                                                       gAGGCCGCGCGCCTGCTTGGGGCCTGGGAAGTACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCt                                                >  4:189683/1‑149 (MQ=255)                                                                                                             gcgcgcCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATg                                          >  2:29277/1‑149 (MQ=255)                                                                                                               gcgcCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCg                                                             <  5:349835/128‑1 (MQ=255)                                                                                                               gcgcCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCg                                                             >  6:349835/1‑128 (MQ=255)                                                                                                                 gcCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTc                                      <  7:48323/149‑1 (MQ=255)                                                                                                                       ttGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCAc                                >  1:341509/1‑149 (MQ=255)                                                                                                                          aGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGc                              <  1:64265/148‑1 (MQ=255)                                                                                                                              cTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCtt                                                                    >  3:270648/1‑106 (MQ=255)                                                                                                                              cTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCtt                                                                    <  4:270648/106‑1 (MQ=255)                                                                                                                               tGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGCCGATGc                        >  5:291746/1‑149 (MQ=255)                                                                                                                                 ggAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGCCGATGCCt                      <  2:244654/149‑1 (MQ=255)                                                                                                                                   aagaaCCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGCCGATGCCTTc                    <  7:338624/149‑1 (MQ=255)                                                                                                                                        cccGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGCCGATGCCTTCGTCcg               >  1:248866/1‑149 (MQ=255)                                                                                                                                        cccGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGCCGATGCCTTCGTCcg               >  5:237877/1‑149 (MQ=255)                                                                                                                                         ccGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCtgcacaacttcgggttcttcccaggcctcaagcaggcgcgcggcctcggcacgcacctcggcggcggcgtccgccagcagggcat              <  7:88952‑M2/149‑86 (MQ=255)                                                                                                                                         ccGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCtgcacaacttcgggttcttcccaggcctcaagcaggcgcgcggcctcggcacgcacctcggcggcggcgtccgc                         <  4:95594‑M2/138‑75 (MQ=255)                                                                                                                                         ccGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCtgcacaacttcgggttcttcccaggcctcaagcaggcgcgcggcctcggcacgcacctcggcggcggcgtccgc                         >  3:95594‑M2/1‑64 (MQ=255)                                                                                                                                         ccGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGCCGATGCCTTCGTCcgc              >  1:312949/1‑149 (MQ=255)                                                                                                                                         ccGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGCCGATGCCTTCGTCcgc              <  1:334569/149‑1 (MQ=255)                                                                                                                                                tgtgCAgcggccaggcgtacaggctcggcggcatcggccagcgcagcgcacagggcttgcacaacttcgggttcttcccaggcctcaagcaggcgcgcggcctcggcacgcacctcggcggcggcgtccgccagcagggcatcggt          <  8:309761‑M1/146‑141 (MQ=255)                                                                                                                                                tgtgCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGTGTCAAGCACGCCGATGCCTTCGTCCGCGCCAGt        <  3:189683/148‑1 (MQ=255)                                                                                                                                                 gtgCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGCCGAt                          >  5:70948/1‑129 (MQ=255)                                                                                                                                                 gtgCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGCCGAt                          <  6:70948/129‑1 (MQ=255)                                                                                                                                                  tgCAgcggccaggcgtacaggctcggcggcatcggccagcgcagcgcacagggcttgcacaacttcgggttcttcccaggcctcaagcaggcgcgcggcctcggcacgcacctcggcggcggcgtccgccagcagggcatcggtga        <  1:156229‑M1/146‑143 (MQ=255)                                                                                                                                                    cAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGCCGATGCCTTCGTCCGCGCCAGTGccc    <  3:138744/148‑1 (MQ=255)                                                                                                                                                    cAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGCCGATGCCTTCGTCCGCGCCAGTGCCCt   <  2:312949/149‑1 (MQ=255)                                                                                                                                                     agcggccaggcgtacaggctcggcggcatcggccagcgcagcgcacagggcttgcacaacttcgggttcttcccaggcctcaagcaggcgcgcggcctcggcacgcacctcggcggcggcgtccgccagcagggcatcggtgagccaag  >  8:192557‑M1/1‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GCCGCATCGCCCTGATCGAGCTGGCCGACCTGGAAGACCCGGATGGCTTGC‑CTTGGCTCACCGATGCCCTGCTGGCGGACGCCGCCGCCGAGGTGCGTGCCGAGGCCGCGCGCCTGCTTGAGGCCTGGGAAGAACCCGAAGTTGTGCAAGCCCTGTGCGCTGCGCTGGCCGATGCCGCCGAGCCTGTACGCCTGGCCGCTGCACAGAGCCTCAGCGAACTTAAAAGCCTTGAAGCCGGCCAGCTGATCCTGCCATGGGTCAAGCACGCCGATGCCTTCGTCCGCGCCAGTGCCCTA  >  NC_002947/261595‑261890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.