| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 550100 = | NA (NA) | 3 (0.060) | 3/234 | NT | 10.3% | coding (775/1194 nt) | tufB | elongation factor Tu‑B |
| ? | NC_002947 | = 550096 | 29 (0.510) | coding (771/1194 nt) | tufB | elongation factor Tu‑B | |||||
TGTGCGGCTTGACCGAACCTGGCTTGACCAGAACCTGGCCACGCTCAACGTCGTCACGCTTGGTACCACGCAGCAGAACGCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAggtggtggtggtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/550241‑550100‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGGTGGTGGTGTCACGCAGACCAACGATTTCCAGCGGATCCTGAACGCGAACGATGCCACGCTCGATACGACCGGTAACAACGGTACCACGACCCGAGATCGAGAACACGTCTTCGATCGGCATCAGGAACGGCTGGTCGATGGCACGAACTGGCT < NC_002947/550096‑549939 TGTGCGGCTTGACCGAACCTGGCTTGACCAGAACCTGGCCACGCTCAACGTCGTCACGCTTGGTACCACGCAGCAGAACGCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAGGTGGTG < 1:189729/149‑1 CGGCTTGACCGAACCTGGCTTGACCAGAACCTGGCCACGCTCAACGTCGTCACGCTTGGTACCACGCAGCAGAACTCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAGGTGGTGGTGG < 8:160373/149‑1 CGGCTTGACCGAACCTGGCTTGACCAGAACCTGGCCACGCTCAACGTCGTCACGCTTGGTACCACGCAGCAGAACGCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAGGTGGTGGTGG > 3:294917/1‑149 CGGCTTGACCGAACCTGGCTTGACCAGAACCTGGCCACGCTCAACGTCGTCACGCTTGGTACCACGCAGCAGAACGCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAGGTGGTGGTG < 1:65626/148‑1 GGCTTGACCGAACCTGGCTTGACCAGAACCTGGCCACGCTCAACGTCGTCACGCTTGGTACCACGCAGCAGAACGCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAGGTGGTGGTGGT < 4:230097/149‑1 GCTTGACCGAACCTGGCTTGACCAGAACCTGGCCACGCTCAACGTCGTCACGCTTGGTACCACGCAGCAGAACGCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAGGTGGTGGTGGTG < 8:137203/149‑1 GCTTGACCGAACCTGGCTTGACCAGAACCTGGCCACGCTCAACGTCGTCACGCTTGGTACCACGCAGCAGAACGCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAGGTGGTGGTGGTG < 3:64349/149‑1 CACGCTCAACGTCGTCACGCTTGGTACCACGCAGCAGAACGCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAG < 8:87766/104‑1 CACGCTCAACGTCGTCACGCTTGGTACCACGCAGCAGAACGCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAG > 7:87766/1‑104 GCTCAACGTCGTCACGCTTGGTACCACGCAGCAGAACGCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAG < 2:224925/101‑1 GCTCAACGTCGTCACGCTTGGTACCACGCAGCAGAACGCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAG > 1:224925/1‑101 TCAACGTCGTCACGCTTGGTACCACGCAGCAGAACGCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAGGTGGTGGTGGTGTCACGCAGACCAACGATTTCCAGCGGATCCTGAACGCG > 6:105300/1‑149 CTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAGGTGGTGGTGGTGTCACGCAGACCAACGGTTTCCAGCGGATCCTGAACGCGAACGATGCCACGCTCGATACGACCGGTAACAACGGTACCACGAC > 8:226885/1‑149 GACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAGGTGGTGGTGG < 5:329040/54‑1 GACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAGGTGGTGGTGG > 6:329040/1‑54 GTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAGGTGGTGGTGGTGTCACGCAGACCAACGATTTCCAGCGGATCCTGAACGCGGACGATGCCACGCTCGATACGACCGGTAACAACGGTACCACGACCCGAGATCGAGAACACGT < 5:105300/149‑1 GTGGTGGTGGTGTCACGCAGACCAACGATTTCCAGCGGATCCTGAACGCGAACGATGCCACGCTCGATACGACCGGTAA > 2:82702/1‑79 GTGGTGGTGGTGTCACGCAGACCAACGATTTCCAGCGGATCCTGAACGCGAACGATGCCACGCTCGATACGACCGGTAA < 1:82702/79‑1 GTGGTGGTGTCACGCAGACCAACGATTTCCAGCGGATCCTGAACGCGAACGATGCCACGCTCGATACGACCGGTAACAACGGTACCACGACCCGAGATCGAGAACACGTCTTCGATCGGCATCAGGAACGGCTGGTCGATGGCAC > 7:117256/1‑145 GTGGTGGTGTCACGCAGACCAACGATTTCCAGCGGATCCTGAACGCGAACGATGCCACGCTCGATACGACCGGTAACAACGGTACCACGACCCGAGATCGAGAACACGTCTTCGATCGGCATCAGGAACGGCTGGTCGATGGCAC < 8:117256/145‑1 GGTGGTGTCACGCAGACCAACGATTTCCAGCGGATCCTGAACGCGAACGATGCCACGCTCGATACGACCGGTAACAACGGTACCACGACCCGAGATCGAGAACACGTCTTCGATCGGCATCAGGAACGGCTGGTCGATGGC > 2:33585/1‑141 GGTGGTGTCACGCAGACCAACGATTTCCAGCGGATCCTGAACGCGAACGATGCCACGCTCGATACGACCGGTAACAACGGTACCACGACCCGAGATCGAGAACACGTCTTCGATCGGCATCAGGAACGGCTGGTCGATGGC < 1:33585/141‑1 GTGTCACGCAGACCAACGATTTCCAGCGGATCCTGAACGCGAACGATGCCACGCTCGATACGACCGGTAACAACGGTACCACGACCCGAGATCGAGAACACGTCTTCGATCGGCATCAGGAACGGCTGGTCGATGGCACGAACTGGCT > 3:135252/1‑148 TGTGCGGCTTGACCGAACCTGGCTTGACCAGAACCTGGCCACGCTCAACGTCGTCACGCTTGGTACCACGCAGCAGAACGCCGCAGTTCTCGCCAGCACGACCTTCGTCCAGCAGCTTGCGGAACATCTCAACACCGGTGCAggtggtggtggtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/550241‑550100‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGGTGGTGGTGTCACGCAGACCAACGATTTCCAGCGGATCCTGAACGCGAACGATGCCACGCTCGATACGACCGGTAACAACGGTACCACGACCCGAGATCGAGAACACGTCTTCGATCGGCATCAGGAACGGCTGGTCGATGGCACGAACTGGCT < NC_002947/550096‑549939 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |