| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 796564 | 72 (1.270) | 4 (0.070) | 4/250 | NT | 5.3% | coding (105/339 nt) | PP_0681 | hypothetical protein |
| ? | NC_002947 | = 796582 | 75 (1.380) | coding (123/339 nt) | PP_0681 | hypothetical protein | |||||
TGAGGGTTTCGGGCTGAACAAGGCTCATTGGAGGGGACGCGGCCATGCGCAACCTCAGCCTCACACGCCAGTGCCTGGGCCTGGTGACCCGTATCGAATGCAGCATCCGCCCGCTGGCCGGTGACAACGGCATGTGGACGTTGCTGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/796416‑796564‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttcACCGGCCATGCCGGCGGCGAACAGCAACGTCCACATGCCGTTGTCACCGGCCAGCGGGCGGATGCTGCATTCGATACGGGTCACCAGGCCCAGGCACTGGCGTGTGAGGCTGAGGTTGCGCATGGCCGCGTCCCCTCCAATGAGCC < NC_002947/796582‑796437 TGAGGGTTTCGGGCTGAACAAGGCTCATTGGAGGGGACGCGGCCATGCGCAACCTCAGCCTCACACGCCAGTGCCTGGGCCTGGTGACCCGTATCGAATGCAGCATCCGCCCGCTGGCCGGTGACAACGGCATGTGGACGTTGCTGTTC > 8:283207/1‑149TGAGGGTTTCGGGCTGAACAAGGCTCATTGGAGGGGACGCGGCCATGCGCAACCTCAGCCTCACACGCCAGTGCCTGGGCCTGGTGACCCGTATCGAATGCAGCATCCGCCCGCTGGCCGGTGACAACGGCATGTGGACGTTGCTGTT > 1:4990/1‑148 AGGGTTTCGGGCTGAACAAGGCTCATTGGAGGGGACGCGGCCATGCGCAACCTCAGCCTCACACGCCAGTGCCTGGGCCTGGTGACCCGTATCGAATGCAGCATCCGCCCGCTGGCCGGTGACAACGGCATGTGGACGTTGCTGTTC < 6:260178/147‑1 CTCATTGGAGGGGACGCGGCCATGCGCAACCTCAGCCTCACACGCCAGTGCCTGGGCCTGGTGACCCGTATCGAATGCAGCATCCGCCCGCTGGCCGGTGACAACGGCATGTGGACGTTGCTGTTCACCGGCCATGCCGGCGGCGAACA < 5:159738/149‑1 TCATTGGAGGGGACGCGGCCATGCGCAACCTCAGCCTCACACGCCAGTGCCTGGGCCTGGTGACCCGTATCGAATGCAGCATCCGCCCGCTGGCCGGTGACAACGGCATGTGGACGTTGCTG < 1:149497/122‑1 TCATTGGAGGGGACGCGGCCATGCGCAACCTCAGCCTCACACGCCAGTGCCTGGGCCTGGTGACCCGTATCGAATGCAGCATCCGCCCGCTGGCCGGTGACAACGGCATGTGGACGTTGCTG > 2:149497/1‑122 CGGCCATGCGCAACCTCAGCCTCACACGCCAGTGCCTGGGCCTGGTGACCCGTATCGAATGCAGCATCCGCCCGCTGGCCGGTGACAACGGCATGTGGACGTTGCTGTTCACCGGCCATGCCGGCGGCGAACAGCAACGTCCACATGCC < 2:4990/149‑1 CGGCATGTGGACGTTGCTGTTCGCCGCCGGCATGGCCGGTGAACAGCAACGTCCACATGCCGTTGTCACCGGCCAGCGGGCGGATGCTGCATTCGATACGGGTCACCAGGCCC < 7:238923/113‑1 CGGCATGTGGACGTTGCTGTTCGCCGCCGGCATGGCCGGTGAACAGCAACGTCCACATGCCGTTGTCACCGGCCAGCGGGCGGATGCTGCATTCGATACGGGTCACCAGGCCC > 8:238923/1‑113 TTCACCGGCCATGCCGGCGGCGAACAGCAACGTCCACATGCCGTTGTCACCGGCCAGCGGGCGGATGCTGCATTCGATACGGGTCACCAGGCCCAGGCACTGGCGTGTGAGGCTGAGGTTGCGCATGGCCGCGTCCCCTCCAATGAGCC > 7:283207/1‑149 TGAGGGTTTCGGGCTGAACAAGGCTCATTGGAGGGGACGCGGCCATGCGCAACCTCAGCCTCACACGCCAGTGCCTGGGCCTGGTGACCCGTATCGAATGCAGCATCCGCCCGCTGGCCGGTGACAACGGCATGTGGACGTTGCTGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/796416‑796564‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttcACCGGCCATGCCGGCGGCGAACAGCAACGTCCACATGCCGTTGTCACCGGCCAGCGGGCGGATGCTGCATTCGATACGGGTCACCAGGCCCAGGCACTGGCGTGTGAGGCTGAGGTTGCGCATGGCCGCGTCCCCTCCAATGAGCC < NC_002947/796582‑796437 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |