| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 816176 = | 39 (0.690) | 4 (0.070) | 4/246 | NT | 9.0% | coding (125/1158 nt) | PP_0702 | MFS transporter |
| ? | NC_002947 | 816212 = | 44 (0.820) | coding (161/1158 nt) | PP_0702 | MFS transporter | |||||
GCCGAACGCGGACTCGAGCAAGGCGATGCTGACCGTGCACAGGCTGAAACACAGCAGATAGATGGTGCGCCGGGTGAGATGGCGGCAGCAGGCGTCGACCAGAAAAGCCGAGAGCATCATGCCGGCGGCAGGGATGGCCGAGATGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/816324‑816176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgatgcTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTCGAGTCCGCGTTCGGCTCGTTGTGGCTGCTGGCGTTGCTGCGCCTG > NC_002947/816212‑816354 GCCGAACGCGGACTCGAGCAAGGCGATGCTGACCGTGCACAGGCTGAAACACAGCAGATAGATGGTGCGCCGGGTGAGATGGCGGCAGCAGGCGTCGACCAGAAAAGCCGAGAGCATCATGCCGGCGGCAGGGATGGCCGAGATGATGC < 7:205759/149‑1 TCGAGCAAGGCGATGCTGACCGTGCACAGGCTGAAACACAGCAGATAGATGGTGCGCCGGGTGAGATGGCTGCAGCAGGCGTCGACCAGAAAAGCCGAGAGCATCATGCCGGCGGCAGGGATGGCCGAGA < 8:316608/130‑1 TCGAGCAAGGCGATGCTGACCGTGCACAGGCTGAAACACAGCAGATAGATGGTGCGCCGGGTGAGATGGCGGCAGCAGGCGTCGACCAGAAAAGCCGAGAGCATCATGCCGGCGGCAGGGATGGCCGAGA > 7:316608/1‑130 GAAAAGCCGAGAGCATCATGCCGGCGGCAGGGATGGCAGAGATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTCGAG > 2:174858/1‑149 CCGAGAGCATCATGCCGGCGGCAGGGATGGCTGAGATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTCGAGTCCGCG < 1:174858/149‑1 GAGAGCATCATGCCGGCGGCAGGGATGGCCGAGATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTC < 1:134500/138‑1 GAGAGCATCATGCCGGCGGCAGGGATGGCCGAGATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTC > 2:134500/1‑138 GATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTCGAGTCCGCGTTCGGCTCGTTGTGGCTGCTGGCGTTGCTGCGCCTG > 5:352605/1‑148 GATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTCGAGTCCGCGTTCGGCTCGTTGTGGCTGCTGGCGTTGCTGCGCCTG < 6:352605/148‑1 GCCGAACGCGGACTCGAGCAAGGCGATGCTGACCGTGCACAGGCTGAAACACAGCAGATAGATGGTGCGCCGGGTGAGATGGCGGCAGCAGGCGTCGACCAGAAAAGCCGAGAGCATCATGCCGGCGGCAGGGATGGCCGAGATGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/816324‑816176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgatgcTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTCGAGTCCGCGTTCGGCTCGTTGTGGCTGCTGGCGTTGCTGCGCCTG > NC_002947/816212‑816354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |