New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	816176 =	39 (0.690)	4 (0.070)	4/246	NT	9.0%	coding (125/1158 nt)	PP_0702	MFS transporter
	?	NC_002947	816212 =	44 (0.820)					coding (161/1158 nt)	PP_0702	MFS transporter

GGTTTGCCAGGAGTGGTACATGAACATGCGTTTGTTGGCGGGCTTATTGTTCGCTGTTTCTGTCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTCGAGTCCGCGTTCGGC  >  NC_002947/816033‑816324                                                                                                                                                |                                                                                                                                                     ggTTTGCCAGGAGTGGTACATGAACATGCGTTTGTTGGCGGGCTTATTGTTCGCTGTTTCTGTCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGcatca                                                                                                                                                 <  3:167015/149‑1 (MQ=255) caggcgcagcaacgccagcagccacaacgagccgaacgcggactcgagcaaggcgatgctgaccgtgcacaggctgaaacacagcagatagatggtgcgccgggtgagatggcggcagcaggcgtcgaccagaaaagccgagaGcatc                                                                                                                                                  <  6:352605‑M1/5‑1 (MQ=255) caggcgcagcaacgccagcagccacaacgagccgaacgcggactcgagcaaggcgatgctgaccgtgcacaggctgaaacacagcagatagatggtgcgccgggtgagatggcggcagcaggcgtcgaccagaaaagccgagaGcatc                                                                                                                                                  >  5:352605‑M1/144‑148 (MQ=255)         aGGAGTGGTACATGAACATGCGTTTGTTGGCTGGCTTATTGTTCGCTGTTTCTGTCGTGGGTTTCATTTTGGGGGCCAGCTTGACGATGGTGTCGTTGCTCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCTGCATCATCTCGGc                                                                                                                                          >  7:328313/1‑148 (MQ=255)         aGGAGTGGTACATGAACATGCGTTTGTTCGCGGGCTTATTGTTCGCTGTTTCTGTCGTGGGTTTCAGTTTGGGGGCCAGGTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGGGAGCACACTGGAAATCGGCATCATCTCGGc                                                                                                                                          >  2:277335/1‑148 (MQ=255)                       aaCATGCGTTTGTTGGCGGGCTTATTGTTCGCTGTTTCTGTCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGccgccg                                                                                                                            <  2:152750/148‑1 (MQ=255)                         cATGCGTTTGTTGGCGGGCTTATTGTTCGCTGTTTCTGTCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGTGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCa                                                                                                                         >  2:331014/1‑149 (MQ=255)                              gTTTGTTGGCGGGCTTATTGTTCGCTGTTTCTGTCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATATCGGCCATCCCTgcc                                                                                                                                >  8:173575/1‑137 (MQ=255)                               tttGTTGGCGGGCTTATTGTTCGCTGTTTCTGTCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGTGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGc                                                                                                                   <  1:331014/149‑1 (MQ=255)                                     cgcggactcgagcaaggcgatgctgaccgtgcacaggctgaaacacagcagatagatggtgcgccgggtgagatggcggcagcaggcgtcgaccagaaaagccgagaGCATCATCTCAGCCATCCCTGCCGCCGGCATGATGCTCTCgg                                                                                                             <  1:174858‑M1/42‑1 (MQ=255)                                           ctcgagcaaggcgatgctgaccgtgcacaggctgaaacacagcagatagatggtgcgccgggtgagatggcggcagcaggcgtcgaccagaaaagccgagaGCATCATCTCTGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTc                                                                                                       >  2:174858‑M1/102‑149 (MQ=255)                                            ttATTGTTCGCTGTTTCTGTCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCt                                                                                                      >  3:332699/1‑149 (MQ=255)                                              gagcaaggcgatgctgaccgtgcacaggctgaaacacagcagatagatggtgcgccgggtgagatggcggcagcaggcgtcgaccagaaaagccgagaGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCtctc                                                                                                               <  1:134500‑M1/40‑1 (MQ=255)                                              gagcaaggcgatgctgaccgtgcacaggctgaaacacagcagatagatggtgcgccgggtgagatggcggcagcaggcgtcgaccagaaaagccgagaGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCtctc                                                                                                               >  2:134500‑M1/99‑138 (MQ=255)                                               ttGTTCGCCGTTTCTGTCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTgg                                                                                                    <  1:1169/148‑1 (MQ=255)                                                 gTTCGCTGTTTCTGTCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTc                                                                                                  <  7:203761/148‑1 (MQ=255)                                                 gTTCGCTGTTTCTGTCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTc                                                                                                  <  4:75844/148‑1 (MQ=255)                                                  ttCGCTGTTTCTGTCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGa                                                                                                >  5:319879/1‑149 (MQ=255)                                                            cTGTCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCtgctgc                                                                                      >  3:277543/1‑149 (MQ=255)                                                               tCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCtgctgc                                                                                      <  4:332699/146‑1 (MQ=255)                                                                 gTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCAATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCa                                                                                 >  4:304853/1‑149 (MQ=255)                                                                   gggTTTAAGATTGGGGGCCAGATTGCCCCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGACCACACTGCAAATCGGCATCATCTCGGACATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCAGACAt                                                                                >  6:327316/1‑148 (MQ=255)                                                                                 gggCCAGCTGGGCGCTGGTGTCGCTGCGCCTGCATGAAGCGGGGTCGAGCACACTTGAAAGCGGCTTCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGTCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCAca                                                                 <  8:328313/149‑2 (MQ=255)                                                                                     cAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTGTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCatct                                                             <  1:277335/149‑1 (MQ=255)                                                                                       gCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCatctat                                                           >  1:143999/1‑149 (MQ=255)                                                                                             cGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATctgctg                                                     >  7:301628/1‑149 (MQ=255)                                                                                              gCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCtgt                                                    >  7:84559/1‑149 (MQ=255)                                                                                                  gtgtcgtgtcGCCTGGATGAAGCGGGGGCGAGCACACTGGAAATAGGCATCATCTCTGCCTTCCCTGCGGCCTTCATGATGGTGTCGGCTTTTCTGGTCGACGCCTGCTGCCGACATCTCACCCGGCGCACGATCTATCTGCTgtgt                                                  <  5:158947/147‑1 (MQ=255)                                                                                                  gtgtCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTgtgt                                                  <  4:277543/147‑1 (MQ=255)                                                                                                    gtCGTGGCGCCGGCCTGAAGCGGCGGCGAGCACACTGGAAATCGGCATCATCTCGGCGATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCa                                              <  8:307173/149‑1 (MQ=255)                                                                                                       gTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGcc                                           >  8:41060/1‑149 (MQ=255)                                                                                                            gcCTGCATGAAGCGGTGGCGAGCACACTTGAAATCGTCATCATCTCGGCCATCCCTGCCGCGGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATGTGCTGTGTTTCAGCCTGTGc                                      <  5:327316/149‑1 (MQ=255)                                                                                                            gcCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCtgtg                                       >  7:167465/1‑148 (MQ=255)                                                                                                            gcCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCAACCCTGCCGACGGCATGATGCTCTCGGCTTTTCAGGTCGACGCCTGCTGCCGCCATCTCACACGGCGCACCATCTATCTGCTGTGTTTCAGCCtgtg                                       >  8:59089/1‑148 (MQ=255)                                                                                                              cTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGc                                      >  2:28515/1‑147 (MQ=255)                                                                                                              cTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGc                                      <  1:28515/147‑1 (MQ=255)                                                                                                               tGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACg                                   >  6:175421/1‑149 (MQ=255)                                                                                                                gCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACgg                                  >  7:114510/1‑149 (MQ=255)                                                                                                                 cATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACgg                                  <  8:301628/148‑1 (MQ=255)                                                                                                                  aTGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGt                                 >  4:71424/1‑148 (MQ=255)                                                                                                                   tGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTgtgt                                                  <  6:143864/130‑1 (MQ=255)                                                                                                                   tGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTgtgt                                                  >  5:143864/1‑130 (MQ=255)                                                                                                                           gggCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGcc                       <  8:114510/149‑1 (MQ=255)                                                                                                                                     acTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTCGAGt             >  3:219942/1‑149 (MQ=255)                                                                                                                                       tGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTCGAGTcc           >  1:68192/1‑149 (MQ=255)                                                                                                                                           aaTCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTCGAGTCCGCGt       <  5:175421/149‑1 (MQ=255)                                                                                                                                           aaTCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTCGAGTCCGCGt       <  7:41060/149‑1 (MQ=255)                                                                                                                                              cGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACTCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGtt                                                 <  3:353201/104‑1 (MQ=255)                                                                                                                                              cGGCATCATCACGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGtt                                                 >  4:353201/1‑104 (MQ=255)                                                                                                                                                GCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTCGAGTCCGCGTTCGGc  <  7:205759‑M1/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                     GGTTTGCCAGGAGTGGTACATGAACATGCGTTTGTTGGCGGGCTTATTGTTCGCTGTTTCTGTCGTGGGTTTCAGTTTGGGGGCCAGCTTGCCGCTGGTGTCGTTGCGCCTGCATGAAGCGGGGGCGAGCACACTGGAAATCGGCATCATCTCGGCCATCCCTGCCGCCGGCATGATGCTCTCGGCTTTTCTGGTCGACGCCTGCTGCCGCCATCTCACCCGGCGCACCATCTATCTGCTGTGTTTCAGCCTGTGCACGGTCAGCATCGCCTTGCTCGAGTCCGCGTTCGGC  >  NC_002947/816033‑816324

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.