| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 934031 | 62 (1.090) | 3 (0.060) | 3/246 | NT | 5.1% | coding (11591/18933 nt) | PP_0806 | surface adhesion protein |
| ? | NC_002947 | = 934100 | 52 (0.970) | coding (11522/18933 nt) | PP_0806 | surface adhesion protein | |||||
ACTGACCTGCAAGATCTGGGCGTTGAGCTGGGCGTTCTGGAAGAACACACGGAAGGTGCCGTCGCTGCCGACCGTGGCGCTACCCAGCGTGGTGCCACCGGAGGTCACGGTAATCAGCGAGCCGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/933904‑934031‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaccgGTACCGAAGTGGCCACGCCTTCGGCCCTTGCCATCAGCGTCGACGGTTTCCTGCTGACTGGCCAAGGTACGGTCGGCTCGCTGATTACCGTGACCTCCGGTGGCACCACGCTGGGTAGCGCCACGGTCGGCAGCGACGGCACC < NC_002947/934100‑933958 ACTGACCTGCAAGATCTGGGCGTTGAGCTGGGCGTTCTGGAAGAACACACGGAAGGTGCCGTCGCTGCCGACCGTGGCGCTACCCAGCGTGGTGCCACCGGAGGTCACGGTAATCAGCGAGCCGAC < 7:338417/126‑1ACTGACCTGCAAGATCTGGGCGTTGAGCTGGGCGTTCTGGAAGAACACACGGAAGGTGCCGTCGCTGCCGACCGTGGCGCTACCCAGCGTGGTGCCACCGGAGGTCACGGTAATCAGCGAGCCGAC > 8:338417/1‑126 ACACACGGAAGGTGCCGTCGCTGCCGACCGTGGCGCTACCCAGCGTGGTGCCACCGGAGGTCACGGTAATCAGCGAGCCGACCGGTACCGAAGTGGCCACGCCTTCGGCCCTTGCCATCAGCGTCGACGGTTTCCTGCTGACTGGCC > 1:127154/1‑147 ACACACGGAAGGTGCCGTCGCTCCCGACCGTGGCGCTACCCAGCGTGGTGCCACCGGAGGTCACGGTAATCAGCGAGCCGACCGGTACCGAAGTGGCCACGCCTTCGGCCCTTGCCATCAGCGTCGACGGTTTCCTGCTGACTGGCCAA < 6:209949/149‑1 GTCGCTGCCGACCGTGGCGCTACCCAGCGTGGTGCCACCGGAGGTCACGGTAATCAGCGAGCCGACCGGTACCGAAGTGGCCACGCCTTCGGCCCTTGCCATCAGCGTCGACGGTTTCCTGCTGACTGGCCAAGGTACGGTCGGCTCGC < 2:127154/149‑1 CGACCGGTACCGAAGTGGCCACGCCTTCGGCCCTTGCCATCAGCGTCGACGGTTTCCTGCTGACTGGCCAAGGTACGGTCGGCTCGCTGATTACCGTGACCTCCGGTGGCACCACGCTGGGTAGCGCCACGGTCGGCAGCGACGGCACC > 6:73250/1‑149 ACTGACCTGCAAGATCTGGGCGTTGAGCTGGGCGTTCTGGAAGAACACACGGAAGGTGCCGTCGCTGCCGACCGTGGCGCTACCCAGCGTGGTGCCACCGGAGGTCACGGTAATCAGCGAGCCGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/933904‑934031‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaccgGTACCGAAGTGGCCACGCCTTCGGCCCTTGCCATCAGCGTCGACGGTTTCCTGCTGACTGGCCAAGGTACGGTCGGCTCGCTGATTACCGTGACCTCCGGTGGCACCACGCTGGGTAGCGCCACGGTCGGCAGCGACGGCACC < NC_002947/934100‑933958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |