New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1074430 =	83 (1.460)	4 (0.070)	3/254	NT	5.3%	coding (426/1452 nt)	gatA	glutamyl‑tRNA(Gln) amidotransferase subunit A
	?	NC_002947	1074483 =	61 (1.100)					coding (373/1452 nt)	gatA	glutamyl‑tRNA(Gln) amidotransferase subunit A

TCGACAACTTCAAGGCGCCCTATGACGCCACCGTGGTCGCCAAGCTGGCGGAAGCCGGCATGGTCACCCTGGGCAAGACCAACATGGACGAGTTCGCCATGGGTTCGGCCAACGAATCCAGCCATTACGGCGCGGTGAAGAACCCGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1074578‑1074430 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggCGAACTCGTCCATGTTGGTCTTGCCCAGGGTGACCATGCCGGCTTCCGCCAGCTTGGCGACCACGGTGGCGTCATAGGGCGCCTTGAAGTTGTCGAGCATCTTCGAGCCGCAGCTGGTGCGTACGCCGTTGGTGCAGAACAGGTCTTT  >  NC_002947/1074483‑1074630                                                                                                                                                                                                                                                                                                           TCGACAACTTCAAGGCGCCCTATGACGCCACCGTGGTCGCCAAGCTGGCGGAAGCCGGCATGGTCACCCTGGGCAAGACCAACATGGACGAGTTCGCCATGGGTTCGGCCAACGAATCCAGCCATTACGGCGCGGTGAAGAACCCGTG                                                                                                                                                       >  8:107494/1‑148                                                                                                GCCATGGGTTCGGCCAACGAATCCAGCCATTACGGCGCGGTGAAGAACCCGTGGCGAACTCGTCCATGTTGGTCTTGCCCAGGGTGACCATGCCGGCTTCCGCCAGCTTGGCGACCACGGTGGCGTCATAGGGCGCCTTGAAGTTGTC                                                        >  8:49391/1‑148                                                                                                 CCATGGGTTCGGCCAACGAATCCAGCCATTACGGCGCGGTGAAGAACCCGTGGCGAACTCGTCCATGTTGGTCTTGCCCAGGGTGACCATGCCGGCTTCCGCCAGCTTGGCGACCACGGTGGCGTCATAGGGCGCCTTGAAGTTGTCGA                                                      <  7:49391/149‑1                                                                                                  CATGGGTTCGGCCAACGAATCCAGCCATTACGGCGCGGTGAAGAACCCGTGGCGAACTCGTCCATGTTGGTCTTGCCCAGGGTGACCATGCCGGCTTCCGCCAGCTTGGCGACCACGGTGGCGTCATAGGGCGCCTTGAAGTTGTCGAG                                                     >  4:99648/1‑149                                                                                                  CATGGGTTCGGCCAACGAATCCAGCCATTACGGCGCGGTGAAGAACCCGTGGCGAACTCGTCCATGTTGGTCTTGCCCAGGGTGACCATGCCGGCTTCCGCCAGCTTGGCGACCACGGTGGCGTCATAGGGCGCCTTGAAGTTGTCGAG                                                     >  6:112150/1‑149                                                                                                                                                     GCGAACTCGTCCATGTTGGTCTTGCCCAGGGTGACCATGCCGGCTTCCGCCAGCTTGGCGACCACGGTGGCGTCATAGGGCGCCTTGAAGTTGTCGAGCATCTTCGAGCCGCAGCTGGTGCGTACGCCGTTGGTGCAGAACAGGTCTTT  <  2:336169/149‑1                                                                                                                                                                                                                                                                                                           TCGACAACTTCAAGGCGCCCTATGACGCCACCGTGGTCGCCAAGCTGGCGGAAGCCGGCATGGTCACCCTGGGCAAGACCAACATGGACGAGTTCGCCATGGGTTCGGCCAACGAATCCAGCCATTACGGCGCGGTGAAGAACCCGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1074578‑1074430 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggCGAACTCGTCCATGTTGGTCTTGCCCAGGGTGACCATGCCGGCTTCCGCCAGCTTGGCGACCACGGTGGCGTCATAGGGCGCCTTGAAGTTGTCGAGCATCTTCGAGCCGCAGCTGGTGCGTACGCCGTTGGTGCAGAACAGGTCTTT  >  NC_002947/1074483‑1074630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.