New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1562323 = | 59 (1.040) | 4 (0.070) | 3/248 | NT | 6.7% | coding (65/1476 nt) | PP_1372 | hypothetical protein |
? | NC_002947 | 1562361 = | 56 (1.040) | coding (103/1476 nt) | PP_1372 | hypothetical protein |
CCGGCAGCACCCAGGCCACAAAGGTCGCCTTTGACATCCGCGGCGAACACCGCCACCCCTGCGTCGCTGAACACCTCCGCCAGGCGCTGCAGGGTGACGGTCTTGCCAGTACCGGTTGCGCCAGCCACCAGACCGTGGCGGTTGGCCAGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1562476‑1562323 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcaACCGGTACTGGCAAGACCGTCACCCTGCAGCGCCTGGCGGAGGTGTTCAGCGACGCAGGGGTGGCGGTGTTCGCCGCGGATGTCAAAGGCGACCTTTGTGGCCTGGGTGCTGCCGGTGCGCCACAGGGCAAGGTGGCTGAGC > NC_002947/1562361‑1562502 CCGGCAGCACCCAGGCCACAAAGGTCGCCTTTGACATCCGCGGCGAACACCGCCACCCCTGCGTCGCTGAACACCTCCGCCAGGCGCTGCAGGGTGACGGTCTTGCCAGTACCGGTTGCGCCAGCCACCAGACCGTGGCGCTTGGCCAG > 8:273752/1‑149 GTTGCGCCAGCCACCAGACCGTGGCGGTTGGCCAGGCGCAACCGGTACTGGCAAGACCGTCACCCTGCAGCGCCTGGCGGAGGTGTTCAGCGACGCAGGGGTGGCGGTGTTCGCCGCGGATGTCAAAGGCGACCTTTGTGGCCTGGGTG > 7:167679/1‑149 GTTGCGCCAGCCACCAGACCGTGGCGGTTGGCCAGGCGCAACCGGTACTGGCAAGACCGTCACCCTGCAGCGCCTGGCGGAGGTGTTCAGCGACGCAGGGGTGGCGGTGTTCGCCGCGGATGTC > 1:76766/1‑124 GTTGCGCCAGCCACCAGACCGTGGCGGTTGGCCAGGCGCAACCGGTACTGGCAAGACCGTCACCCTGCAGCGCCTGGCGGAGGTGTTCAGCGACGCAGGGGTGGCGGTGTTCGCCGCGGATGTC < 2:76766/124‑1 CGCCAGCCACCAGACCGTGGCGGTTGGCCAGGCGCAACCGGTACTGGCAAGACCGTCACCCTGCAGCGCCTGGCGGAGGTGTTCAGCGACGCAGGGGTGGCGGTGTTCGCCGCGGATGTCAAAGGCGACCTTTGTGGCCTGGGTGCTG < 8:167679/148‑1 GCGCAACCGGTACTGGCAAGACCGTCACCCTGCAGCGCCTGGCGGAGGTGTTCAGCGACGCAGGGGTGGCGGTGTTCGCCGCGGATGTCAAAGGCGACCTTTGTGGCCTGGGTGCTGCCGGTGCGCCACAGGGCAAGGTGGCTGAGC < 3:239421/147‑1 GCGCAACCGGTACTGGCAAGACCGTCACCCTGCAGCGCCTGGCGGAGGTGTTCAGCGACGCAGGGGTGGCGGTGTTCGCCGCGGATGTCAAAGGCGACCTTTGTGGCCTGGGTGCTGCCGGTGCGCCACAGGGCAAGGTGGCTGAGC < 4:82064/147‑1 GCGCAACCGGTACTGGCAAGACCGTCACCCTGCAGCGCCTGGCGGAGGTGTTCAGCGACGCAGGGGTGGCGGTGTTCGCCGCGGATGTCAAAGGCGACCTTTGTGGCCTGGGTGCTGCCGGTGCGCCACAGGGCAAGGT > 5:3405/1‑139 GCGCAACCGGTACTGGCAAGACCGTCACCCTGCAGCGCCTGGCGGAGGTGTTCAGCGACGCAGGGGTGGCGGTGTTCGCCGCGGATGTCAAAGGCGACCTTTGTGGCCTGGGTGCTGCCGGTGCGCCACAGGGCAAGGT < 6:3405/139‑1 CCGGCAGCACCCAGGCCACAAAGGTCGCCTTTGACATCCGCGGCGAACACCGCCACCCCTGCGTCGCTGAACACCTCCGCCAGGCGCTGCAGGGTGACGGTCTTGCCAGTACCGGTTGCGCCAGCCACCAGACCGTGGCGGTTGGCCAGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1562476‑1562323 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcaACCGGTACTGGCAAGACCGTCACCCTGCAGCGCCTGGCGGAGGTGTTCAGCGACGCAGGGGTGGCGGTGTTCGCCGCGGATGTCAAAGGCGACCTTTGTGGCCTGGGTGCTGCCGGTGCGCCACAGGGCAAGGTGGCTGAGC > NC_002947/1562361‑1562502 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |