New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1841469 = | 78 (1.380) | 4 (0.080) | 4/244 | NT | 5.3% | coding (534/1029 nt) | ldhA | D‑lactate dehydrogenase |
? | NC_002947 | 1841511 = | 71 (1.340) | coding (492/1029 nt) | ldhA | D‑lactate dehydrogenase |
CTCAACCGGCGTCTGCATCGGGCCTACAACCGCACCCGCGAAGGTGACTTCACCCTGCACGGGCTGACCGGCTTCGACCTGCACGGGAAAACCGTCGGGGTGGTCGGTACCGGCCAGATCGGGGTCGCCTTCGCTCGCATCATGGCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1841618‑1841469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccggtACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCGGCAACGGCGTGT > NC_002947/1841511‑1841658 CTCAACCGGCGTCTGCATCGGGCCTACAACCGCACCCGCGAAGGTGACTTCACCCTGCACGGGCTGACCGGCTTCGACCTGCACGGGAAAACCGTCGGGGTGGTCGGTACCGGCCAGATCGGGGTCGCCTTCGCTCGCATCATGGCCGG > 5:249332/1‑149 GTACCGGCCAGATCGGGGTCGCCTTCGCTCGCATCATGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCAC < 1:344439/109‑1 GTACCGGCCAGATCGGGGTCGCCTTCGCTCGCATCATGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCAC > 2:344439/1‑109 TACCGGCCAGATCGGGGTCGCCTTCGCTCGCATCATGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTG > 5:307886/1‑149 CAGATCGGGGTCGCCTTCGCTCGCATCATGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCA < 6:307886/149‑1 GGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCGGCAACG > 6:201774/1‑149 GCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCATGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCGGCAACG < 3:70045/148‑1 GCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCG < 3:112084/142‑1 CGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCGGCAACGGCG < 5:201774/149‑1 TACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCGGCAACGGCGTGT < 4:33741/149‑1 CTCAACCGGCGTCTGCATCGGGCCTACAACCGCACCCGCGAAGGTGACTTCACCCTGCACGGGCTGACCGGCTTCGACCTGCACGGGAAAACCGTCGGGGTGGTCGGTACCGGCCAGATCGGGGTCGCCTTCGCTCGCATCATGGCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1841618‑1841469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccggtACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCGGCAACGGCGTGT > NC_002947/1841511‑1841658 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |