New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1841469 =78 (1.380)4 (0.080) 4/244 NT 5.3% coding (534/1029 nt) ldhA D‑lactate dehydrogenase
?NC_002947 1841511 = 71 (1.340)coding (492/1029 nt) ldhA D‑lactate dehydrogenase

TGATGCGGGCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCGGCAACGGCGTGT  >  NC_002947/1841363‑1841658
                                                                                                                                                    |                                                                                                                                                   
caaccggcgtctgcatcgggcctacaaccgcacccgcgaaggtgacttcaccctgcacgggctgaccggcttcgacctgcacgggaaaaccgtcggggtggtcggtACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTa                                                                                                                                                     >  5:307886‑M1/107‑149 (MQ=255)
  atgCGGGCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTAcc                                                                                                                                                   <  6:266718/149‑1 (MQ=255)
    gCGGGCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCg                                                                                                                                                  <  2:199131/148‑1 (MQ=255)
     cGGGCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCGAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGac                                                                                                                                                <  7:122072/149‑1 (MQ=255)
       ggCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGacca                                                                                                                                              <  3:338005/149‑1 (MQ=255)
         cTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGaccacc                                                                                                                                            <  3:348115/149‑1 (MQ=255)
          ttCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGCCCAccc                                                                                                                                           >  4:238638/1‑149 (MQ=255)
          ttCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCAccc                                                                                                                                           >  4:288042/1‑149 (MQ=255)
                 aaTAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGt                                                                                                                                    >  8:270676/1‑149 (MQ=255)
                  taaGCGCGGGCAGGGGCAGGTAGCGGGCGCCAAGCGCCAGGAGCGCTGGGTTGGGGTAGGGGTCGTAAGCCTGCAGCTGGCAGCGGATACCGGCCATGAGGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGtt                                                                                                                                   <  4:269999/147‑1 (MQ=255)
                   tAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGttt                                                                                                                                  >  7:96389/1‑149 (MQ=255)
                     gCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTc                                                                                                                                >  2:311280/1‑149 (MQ=255)
                      cTCGGGCAGGGGCAGGTAGCGGGCGACAAGGGCCAGCAGCTTTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCGCGATCTGGCCGGTACCGACCACCCCGACGGTTTTc                                                                                                                                <  6:197124/148‑1 (MQ=255)
                       tCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTccc                                                                                                                              >  2:52522/1‑149 (MQ=255)
                         gggcaggggcagGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTccc                                                                                                                              <  6:156810/147‑1 (MQ=255)
                           gcaggggcaggTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTg                                                                                                                           >  6:265914/1‑148 (MQ=255)
                            caggggcaggTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCa                                                                                                                         <  7:4401/149‑1 (MQ=255)
                            caggggcaggTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCa                                                                                                                         <  6:312956/149‑1 (MQ=255)
                                   aggTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGaa                                                                                                                  <  7:270676/149‑1 (MQ=255)
                                     gTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAg                                                                                                                 <  4:227661/148‑1 (MQ=255)
                                        gCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCgg                                                                                                             >  2:13135/1‑149 (MQ=255)
                                         gtgacttcaccctgcacgggctgaccggcttcgacctgcacgggaaaaccgtcggggtggtcggtACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTAc                                                                                                                                                    >  2:344439‑M1/66‑109 (MQ=255)
                                         gtgacttcaccctgcacgggctgaccggcttcgacctgcacgggaaaaccgtcggggtggtcggtACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTAc                                                                                                                                                    <  1:344439‑M1/44‑1 (MQ=255)
                                           ggCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCa                                                                                                          <  7:333666/149‑1 (MQ=255)
                                           ggCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCa                                                                                                          <  4:175849/149‑1 (MQ=255)
                                           ggCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCa                                                                                                          <  1:311280/149‑1 (MQ=255)
                                               ccAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGccc                                                                                                      >  8:128435/1‑149 (MQ=255)
                                                caatgcccAGCAGCTCTGGGATGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATTCGAGCGAAGGAGACCCCGATCTGGACGGTACCCACCACCACGACGGTTTTCCCGTGCAGGTCGAAGCCGGACAGCCCg                                                                                                     >  8:108719/7‑149 (MQ=255)
                                                cAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCg                                                                                                     >  4:70045/1‑149 (MQ=255)
                                                   gggCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGc                                                                                                  <  7:128435/149‑1 (MQ=255)
                                                    ggCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCa                                                                                                 <  3:299343/149‑1 (MQ=255)
                                                      ccAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCg                                                                                                              >  7:223252/1‑134 (MQ=255)
                                                      ccAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCg                                                                                                              <  8:223252/134‑1 (MQ=255)
                                                           agcTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGaa                                                                                          <  4:265529/149‑1 (MQ=255)
                                                            gcTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAg                                                                                         >  7:149223/1‑149 (MQ=255)
                                                              tctGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGt                                                                                        >  4:310676/1‑148 (MQ=255)
                                                                tGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCAc                                                                                     >  1:43920/1‑149 (MQ=255)
                                                                  ggTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCt                                                                                   <  1:52522/149‑1 (MQ=255)
                                                                  ggTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCt                                                                                   >  2:45976/1‑149 (MQ=255)
                                                                       gggTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTcgcg                                                                              >  4:112084/1‑149 (MQ=255)
                                                                        ggTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCgg                                                                             >  3:86198/1‑149 (MQ=255)
                                                                        ggTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTAGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCgg                                                                             >  3:102583/1‑149 (MQ=255)
                                                                         gTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGaa                                                                                          <  3:127034/135‑1 (MQ=255)
                                                                         gTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGaa                                                                                          >  4:127034/1‑135 (MQ=255)
                                                                         gTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCt                                                                                   >  7:44264/1‑142 (MQ=255)
                                                                         gTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCt                                                                                   <  8:44264/142‑1 (MQ=255)
                                                                            ggggTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTg                                                                          <  1:45976/148‑1 (MQ=255)
                                                                               gTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGt                                                                      >  3:54625/1‑149 (MQ=255)
                                                                                  gTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCTGGGTGAAGTCACCTTCGCGGGTGCGGTTg                                                                    <  8:96389/148‑1 (MQ=255)
                                                                                  gTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGgtgt                                                                   >  3:33741/1‑149 (MQ=255)
                                                                                  gTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGGGAAGTCACCTTCGCGGGTGCGGTTg                                                                    >  3:332346/1‑148 (MQ=255)
                                                                                   tAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTa                                                                  <  2:43920/149‑1 (MQ=255)
                                                                                     aGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAg                                                                 <  1:13135/148‑1 (MQ=255)
                                                                                            agcTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATg                                                         <  8:149223/149‑1 (MQ=255)
                                                                                            agcTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATg                                                         <  4:86198/149‑1 (MQ=255)
                                                                                             gcTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATg                                                         >  6:249332/1‑148 (MQ=255)
                                                                                              cTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATg                                                         >  6:72392/1‑147 (MQ=255)
                                                                                                  cAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACg                                                   >  3:222159/1‑149 (MQ=255)
                                                                                                   aGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGc                                                  >  8:84881/1‑149 (MQ=255)
                                                                                                   aGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGc                                                  >  1:222624/1‑149 (MQ=255)
                                                                                                   aGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGc                                                  <  3:310676/149‑1 (MQ=255)
                                                                                                     ccGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCgg                                                                             >  1:255885/1‑120 (MQ=255)
                                                                                                     ccGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCgg                                                                             <  2:255885/120‑1 (MQ=255)
                                                                                                       gAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGAt                                                          >  2:17386/1‑137 (MQ=255)
                                                                                                       gAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGAt                                                          <  1:17386/137‑1 (MQ=255)
                                                                                                        gtaccggccagatcggggtcgccttcgctcgcatcatggccggtACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCAc                                                                                     <  1:344439‑M2/65‑1 (MQ=255)
                                                                                                        gtaccggccagatcggggtcgccttcgctcgcatcatggccggtACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCAc                                                                                     >  2:344439‑M2/45‑109 (MQ=255)
                                                                                                        aaaCCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGtt                                             <  3:288042/149‑1 (MQ=255)
                                                                                                        aaaCCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGtt                                             <  3:238638/149‑1 (MQ=255)
                                                                                                         taccggccagatcggggtcgccttcgctcgcatcatggccggtACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTg                                            >  5:307886‑M2/44‑149 (MQ=255)
                                                                                                           CCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAg                                          >  5:249332‑M1/1‑149 (MQ=255)
                                                                                                                cagatcggggtcgccttcgctcgcatcatggccggtACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCa                                     <  6:307886‑M2/113‑1 (MQ=255)
                                                                                                                    atgCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGAt                                 <  5:265914/149‑1 (MQ=255)
                                                                                                                     tgCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGAt                                 >  2:357670/1‑148 (MQ=255)
                                                                                                                           cgaAGGCGACCCGGATCTGGACGGTACCGACCACACCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCTATGCAGACGCCGGTTGAGTGCCAGGATGAGCGcc                          <  4:102583/149‑1 (MQ=255)
                                                                                                                            gaAGGCGACCCCGATCTGGACGCTACCGACAACCCCGCCGGTTTACCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCGTCGCGGGTGCGGTTGTAGGCCCGCTGCAGACGCCGGTTTAGTGCCAGGATGAGCGccc                         >  8:227245/1‑148 (MQ=255)
                                                                                                                               ggCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCgg                                                                             <  5:232933/94‑1 (MQ=255)
                                                                                                                               ggCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCgg                                                                             >  6:232933/1‑94 (MQ=255)
                                                                                                                                    ccccGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGt                                                                           <  6:161259/91‑1 (MQ=255)
                                                                                                                                    ccccGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGt                                                                           >  5:161259/1‑91 (MQ=255)
                                                                                                                                      ccGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTc               <  2:222624/149‑1 (MQ=255)
                                                                                                                                             ggccggtACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCGGCAACg        >  6:201774‑M2/8‑149 (MQ=255)
                                                                                                                                              gccggtACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCATGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCGGCAACg        <  3:70045‑M2/142‑1 (MQ=255)
                                                                                                                                              gccggtACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCg              <  3:112084‑M2/136‑1 (MQ=255)
                                                                                                                                                cggtACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCGGCAACGGCg     <  5:201774‑M2/145‑1 (MQ=255)
                                                                                                                                                   tACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCGGCAACGGCgtgt  <  4:33741‑M2/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TGATGCGGGCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCATGATGCGAGCGAAGGCGACCCCGATCTGGCCGGTACCGACCACCCCGACGGTTTTCCCGTGCAGGTCGAAGCCGGTCAGCCCGTGCAGGGTGAAGTCACCTTCGCGGGTGCGGTTGTAGGCCCGATGCAGACGCCGGTTGAGTGCCAGGATGAGCGCCACGGCATGCTCGGCAACGGCGTGT  >  NC_002947/1841363‑1841658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.