| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2096753 = | 57 (1.010) | 5 (0.090) | 3/246 | NT | 9.4% | coding (109/396 nt) | msrB | peptide methionine sulfoxide reductase MsrB |
| ? | NC_002947 | 2096809 = | 42 (0.780) | coding (165/396 nt) | msrB | peptide methionine sulfoxide reductase MsrB | |||||
GATGTGTCGCGGATCTCGATCATCGCGCTGTCCTCGATCGGCGCGTAGAAGCTCGGCCAGCCGCAGCCGGCGTCGAACTTGGTCTGCGCATCGA‑ACAGCGGCAGGCCGCAACAGATGCAGTGGTAGATGCCGTCGCGGCGCTCGCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2096901‑2096753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgttCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGCCCGTTGCGACGCGCACCTGGG > NC_002947/2096809‑2096955 GATGTGTCGCGGATCTCGATCATCGCGCTGTCCTCGATCGGCGCGTAGAAGCTCGGCCAGCCGCAGCCGGCGTCGAACTTGGTCTGCGCATCGA‑ACAGCGGCAGGCCGCAACAGATGCAGTGGTAGATGCCGTCGCGGCGCTCGCTGTT < 6:177535/149‑1 ATGTGTCGCGGATCTCGATCATCGCGCTGTCCTCGATCGGCGCGTAGAAGCTCGGCCAGCCGCAGCCGGCGTCGAACTTGGTCTGCGCATCGACACAGCGGCAGGCCGCAACAGATGCAGTGGTAGATGCCGTCGCGGCGCTCGCTGTT < 1:98628/149‑1 TGCGCATCGA‑ACAGCGGCAGGCCGCAACAGATGCAGTGGTAGATGCCGTCGCGGCGCTCGCTGTTCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCG > 5:225055/1‑149 ATCGA‑ACAGCGGCAGGCCGCAACAGATGCAGTGGTAGATGCCGTCGCGGCGCTCGCTGTTCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACA > 1:86709/1‑149 ATCGA‑ACAGCGGCAGGCCGCAACAGATGCAGTGGTAGATGCCGTCGCGGCGCTCGCTGTTCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACA > 5:327575/1‑149 GCCGCAACAGATGCAGTGGTAGATGCCGTCGCGGCGCTCGCTGTTCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGA < 2:86709/149‑1 GCCGCAACAGATGCAGTGGTAGATGCCGTCGCGGCGCTCGCTGTTCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGA < 6:327575/149‑1 gccaCTGTTCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGCCCGTTGCGACGCG > 7:58950/5‑148 TTCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGCCCGTTGCGACGCGCACCTGGG > 8:317047/1‑149 TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGCCCGTTGCGACGCGCACCTGGG < 8:58950/148‑1 GATGTGTCGCGGATCTCGATCATCGCGCTGTCCTCGATCGGCGCGTAGAAGCTCGGCCAGCCGCAGCCGGCGTCGAACTTGGTCTGCGCATCGA‑ACAGCGGCAGGCCGCAACAGATGCAGTGGTAGATGCCGTCGCGGCGCTCGCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2096901‑2096753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgttCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGCCCGTTGCGACGCGCACCTGGG > NC_002947/2096809‑2096955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |