| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2096753 = | 57 (1.010) | 5 (0.090) | 3/246 | NT | 9.4% | coding (109/396 nt) | msrB | peptide methionine sulfoxide reductase MsrB |
| ? | NC_002947 | 2096809 = | 42 (0.780) | coding (165/396 nt) | msrB | peptide methionine sulfoxide reductase MsrB | |||||
AAACCCTGGACGAATGGCGGTCGATGCTCGACCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGCCCGTTGCGACGCGCACCTGGG > NC_002947/2096661‑2096955 | aaaCCCTGGACGAATGGCGGTCGATGCTCGACCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑Tc < 7:288875/149‑1 (MQ=255) tgtcgcggatctcgatcatcgcgctgtcctcgatcggcgcgtagaagctcggccagccgcagccggcgtcgaacttggtctgcgcatcgAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGAt > 5:327575‑M1/90‑149 (MQ=255) tgtcgcggatctcgatcatcgcgctgtcctcgatcggcgcgtagaagctcggccagccgcagccggcgtcgaacttggtctgcgcatcgAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGAt > 1:86709‑M1/90‑149 (MQ=255) cccTGGACGAATGGCGGTCGATGCTCGACCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGAt < 2:223484/149‑1 (MQ=255) ccTGGACGAATGGCGGTCGATGCTCGACCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATg > 7:55859/1‑149 (MQ=255) tGGACGAATGGCGGTCGATGCTCGACCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATgcg > 7:251378/1‑149 (MQ=255) gACGAATGGCGGTCGATGCTCGACCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATgcg > 4:239016/1‑147 (MQ=255) cggatctcgatcatcgcgctgtcctcgatcggcgcgtagaagctcggccagccgcagccggcgtcgaacttggtctgcgcatcgAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCa > 5:225055‑M1/85‑149 (MQ=255) gAATGGCGGTCGATGCTCGACCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATg > 4:10420/1‑142 (MQ=255) gAATGGCGGTCGATGCTCGACCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATg < 3:10420/142‑1 (MQ=255) ggCGGTCGATGCTCGACCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAg > 1:299611/1‑149 (MQ=255) cGGTCGATGCTCGACCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGtt < 4:316237/149‑1 (MQ=255) tCGATGCTCGACCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGa < 8:251378/149‑1 (MQ=255) tCGATGCTCGACCCCGAGCAGTACCAGCTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGa > 1:15224/1‑149 (MQ=255) cTCGACCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCcgg < 8:55859/149‑1 (MQ=255) aCCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCcggctgc < 3:204593/149‑1 (MQ=255) ccGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCcggctgcggc > 6:253119/1‑149 (MQ=255) cGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCcggctgcggct > 6:22149/1‑149 (MQ=255) ccAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGc < 3:239016/148‑1 (MQ=255) ccAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCt > 5:88476/1‑149 (MQ=255) cAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCtt < 5:22149/149‑1 (MQ=255) ggTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCt < 6:88476/149‑1 (MQ=255) gccgccTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCcggctgc < 4:184163/128‑1 (MQ=255) gccgccTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCcggctgc > 3:184163/1‑128 (MQ=255) ccgccTCAAGGGGACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGGCTGCCGCTGT‑TCGATGCGCAGAGCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTAcgctc < 4:80666/149‑3 (MQ=255) ccgccTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACgcgc > 4:204065/1‑149 (MQ=255) ccgccTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACgcgc > 8:338523/1‑149 (MQ=255) cgccTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGcc > 3:252678/1‑149 (MQ=255) cTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGAt < 2:299611/149‑1 (MQ=255) ggCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGa < 2:15224/149‑1 (MQ=255) gCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGAc < 4:252678/149‑1 (MQ=255) ccATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTc < 6:239602/93‑1 (MQ=255) ccATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTc > 5:239602/1‑93 (MQ=255) ccATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCgatgat > 7:329466/1‑149 (MQ=255) cATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATc < 6:189631/149‑1 (MQ=255) cAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATc > 8:299195/1‑145 (MQ=255) tGGCAAGTGCAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATcc > 7:272482/1‑149 (MQ=255) tgcgcatcgaacagcggcaggccgcaacagatgcagtggtagatgccgtcgcggcgctcgctgttCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCcg > 5:225055‑M2/66‑149 (MQ=255) gCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCcggctgcggc < 8:142928/98‑1 (MQ=255) gCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCcggctgcggc > 7:142928/1‑98 (MQ=255) aaGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGa > 7:47720/1‑149 (MQ=255) aaGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGa < 3:204065/149‑1 (MQ=255) aGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGac < 5:253119/149‑1 (MQ=255) atcgaacagcggcaggccgcaacagatgcagtggtagatgccgtcgcggcgctcgctgttCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGaca > 1:86709‑M2/61‑149 (MQ=255) atcgaacagcggcaggccgcaacagatgcagtggtagatgccgtcgcggcgctcgctgttCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGaca > 5:327575‑M2/61‑149 (MQ=255) AACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGTGTCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACAt < 1:98628‑M1/149‑1 (MQ=255) AACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATc < 6:177535‑M1/149‑1 (MQ=255) gccgcaacagatgcagtggtagatgccgtcgcggcgctcgctgttCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGa < 6:327575‑M2/104‑1 (MQ=255) gccgcaacagatgcagtggtagatgccgtcgcggcgctcgctgttCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGa < 2:86709‑M2/104‑1 (MQ=255) gcgACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGTCCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATc < 3:327874/149‑1 (MQ=255) aCTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCAcc > 7:210713/1‑149 (MQ=255) cTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCt > 1:21347/1‑149 (MQ=255) cTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCt < 8:329466/149‑1 (MQ=255) cATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTgcg < 2:21347/149‑1 (MQ=255) gTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGCCCGt > 3:25087/1‑149 (MQ=255) ttGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGccc < 8:272482/146‑1 (MQ=255) cGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGCCCGTTGc > 1:111209/1‑148 (MQ=255) gCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGCCCGTTGCGACgcgc < 7:338523/149‑1 (MQ=255) gccactgttCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGCCCGTTGCGAcgcg > 7:58950‑M2/10‑148 (MQ=255) ttCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGCCCGTTGCGACGCGCACCTggg > 8:317047‑M2/3‑149 (MQ=255) tCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGCCCGTTGCGACGCGCACCTggg < 8:58950‑M2/147‑1 (MQ=255) | AAACCCTGGACGAATGGCGGTCGATGCTCGACCCCGAGCAGTACCAGGTATGCCGCCTCAAGGGCACCGAACGGCCATTCAGTGGCAAGTACAACAGCGAGCGCCGCGACGGCATCTACCACTGCATCTGTTGCGGCCTGCCGCTGT‑TCGATGCGCAGACCAAGTTCGACGCCGGCTGCGGCTGGCCGAGCTTCTACGCGCCGATCGAGGACAGCGCGATGATCGAGATCCGCGACACATCCCACGGCATGATCCGCACCGAGGTCACCTGCGCCCGTTGCGACGCGCACCTGGG > NC_002947/2096661‑2096955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |