New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2138293 = | 40 (0.710) | 4 (0.070) | 4/252 | NT | 7.9% | coding (396/933 nt) | yadG | ABC transporter ATP‑binding protein |
? | NC_002947 | 2138370 = | 55 (1.000) | coding (473/933 nt) | yadG | ABC transporter ATP‑binding protein |
TCAGCTCAGTGAGGAAGCTCCACATCGAGCGGCGCAGCTCGATATCCACCCCGGCGGTGGGTTCGTCCAGGATCAGCAGGCGCGGTTCGTGGATCAATGCGCGGGCAATCATCAGGCGCCGCTTCATGCCGCCGGACAACGAACGCGACTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2138444‑2138293 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcTGATCCTGGACGAACCCACCGCCGGGGTGGATATCGAGCTGCGCCGCTCGATGTGGAGCTTCCTCACTGAGCTGAACCAGAAGGGCATCACCATCATCCTCACCACCCACTATCTGGAAGAGGCTGAGCAGCTGTGCC > NC_002947/2138370‑2138507 TCAGCTCAGTGAGGAAGCTCCACATCGAGCGGCGCAGCTCGATATCCACCCCGGCGGTGGGTTCGTCCAGGATCAGCAGGCGCGGTTCGTGGATCAATGCGCGGGCAATCATCAGGCGCCGCTTCATGCCGCCGGACAACGAACGCGAC > 3:176918/1‑149 AGCTCATTGAGGAAGCTCCAAATCGAGCGGCGCAGCTCGATATCCACCCCGGCGGTGGGTTCGTCCAGGATCAGCAGGCGCGGTTCGTGGATCAATGCGCGGGCAATCATCAGGCGCCGCTTCATGCCGCCGGACAACGAACGCGACT < 8:48548/148‑1 AGGCGCGGTTCGTGGATCAATGCGCGGGGAATCATCAGGCGCCGCTTCATGCCGCCGGACAACGAACGCGACTGCTGATCCTGGACGAACCCACCGCCGGGGTGGATATCGAGCTGCGCCGCTCGATGTGGAGCTTCCTCACTGAGCT > 1:204234/1‑148 GGCGCGGTTCGTGGATCAATGCGCGGGCAATCATCAGGCGCCGCTTCATGCCGCCGGACAACGAACGCGACTGCTGATCCTGGACGAACCCACCGCCGGGGTGGATATCGAGCTGCGCCGCTCGATGT < 1:350942/128‑1 GGCGCGGTTCGTGGATCAATGCGCGGGCAATCATCAGGCGCCGCTTCATGCCGCCGGACAACGAACGCGACTGCTGATCCTGGACGAACCCACCGCCGGGGTGGATATCGAGCTGCGCCGCTCGATGT > 2:350942/1‑128 AACGCGACTGCTGATCCTGGACGAACCCACCGCCGGGGTGGATATCGAGCTGCGCCGCTCGATGTGGAGCTTCCTCACTGAGCTGAACCAGAAGGGCATCACCATCATCCTCACCACCCACTATCTGGAAGAGGCTGAGCAGCTGTGCC < 2:204234/149‑1 GCTGATCCTGGACGAACCCACCGCCGGGGTGGATATCGAGCTGCGCCGCTCGATGTGGAGCTTCCTCACTGAGCTGAACCAGAAGGGCATCACCATCATCCTCACCACCCACTATCTGGAAGAGGCTGAGCAGCTGT < 3:289577/137‑1 GCTGATCCTGGACGAACCCACCGCCGGGGTGGATATCGAGCTGCGCCGCTCGATGTGGAGCTTCCTCACTGAGCTGAACCAGAAGGGCATCACCATCATCCTCACCACCCACTATCTGGAAGAGGCTGAGCAGCTGT > 4:289577/1‑137 TCAGCTCAGTGAGGAAGCTCCACATCGAGCGGCGCAGCTCGATATCCACCCCGGCGGTGGGTTCGTCCAGGATCAGCAGGCGCGGTTCGTGGATCAATGCGCGGGCAATCATCAGGCGCCGCTTCATGCCGCCGGACAACGAACGCGACTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2138444‑2138293 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcTGATCCTGGACGAACCCACCGCCGGGGTGGATATCGAGCTGCGCCGCTCGATGTGGAGCTTCCTCACTGAGCTGAACCAGAAGGGCATCACCATCATCCTCACCACCCACTATCTGGAAGAGGCTGAGCAGCTGTGCC > NC_002947/2138370‑2138507 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |