| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2316582 | 77 (1.360) | 5 (0.090) | 4/246 | NT | 6.1% | coding (386/1548 nt) | PP_2038 | long‑chain‑fatty‑acid‑‑CoA ligase |
| ? | NC_002947 | = 2316620 | 82 (1.530) | coding (424/1548 nt) | PP_2038 | long‑chain‑fatty‑acid‑‑CoA ligase | |||||
AGGTACCGGTCAATGCGCGCCTGGCACCGGATGAAGTGATTCAGGTGCTCAACGACGCCTGCAGTGTCGCGCTGATCGCCGATGCGCAACTCGCCCAGGCGTTGCTGGCCCGCAGGCAGGAGGTACCTGCGTTACGCTTGATCGTGACCTTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2316429‑2316582‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgggCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGGTCACGATCAAGCGTAACGCAGGTACCTCCTGCCTGCGGGCCAGCAACGCCTGGGCGAGTTGCGCATCGGCGATCAGCGCGACACTGCAGGCGTCGTTGAGCAC < NC_002947/2316620‑2316473 AGGTACCGGTCAATGCGCGCCTGGCACCGGATGAAGTGATTCAGGTGCTCAACGACGCCTGCAGTGTCGCGCTGATCGCCGATGCGCAACTCGCCCAGGCGTTGCTGGCCCGCAGGCAGGAGGTACCTGCGTTACGCTTGATCGTGACC > 2:262272/1‑149 GGTACCGGTCAATGCGCGCCTGGCACCGGATGAAGTGATTCAGGTGCTCAACGACGCCTGCAGTGTCGCGCTGATCGCCGATGCGCAACTCGCCCAGGCGTTGCTGGCCCGCAGGCAGGAGGTACCTGCGTTACGCTTGATCGTGACCT < 3:12364/149‑1 GGTACCGGTCAATGCGCGCCTGGCACCGGATGAAGTGATTCAGGTGCTCAACGACGCCTGCAGTGTCGCGCTGATCGCCGATGCGCAACTCGCCCAGGCGTTGCTGGCCCGCAGGCAGGAGGTACCTGCGTTACGCTTGATCGTGACCT < 3:17172/149‑1 CCGGTCAATGCGCGCCTGGCACCGGATGAAGTGATTCAGGTGCTCAACGACGCCTGCAGTGTCGCGCTGATCGGCGATGCGCAACTCGCCCAGGCGTTGCTGGCCCGCAGGCAGGAGGTACCTGCGTTACGCTTGATCGTGACCTTGGG < 7:159808/149‑1 AATGCGCGCCTGGCACCGGATGAAGTGATTCAGGTGCTCAACGACGCCTGCAGTGTCGCGCTGATCGCCGATGCGCAACTCGACCAGGCGTTGCTGGCCCGCAGGCAGGAGGTACCTGCGTTACGCTTGATCGTGAC > 3:256324/1‑137 AATGCGCGCCTGGCACCGGATGAAGTGATTCAGGTGCTCAACGACGCCTGCAGTGTCGCGCTGATCGCCGATGCGCAACTCGACCAGGCGTTGCTGGCCCGCAGGCAGGAGGTACCTGCGTTACGCTTGATCGTGAC < 4:256324/137‑1 CAGGTGCTCAACGACGCCTGCAGTGTCGCGCTGATCGCCGATGCGCAACTCGCCCAGGCGTTGCTGGCCCGCAGGCAGGAGGTACCTGCGTTACGCTTGATCGTGACCTTGGGTGAGCAGTGCGGCATAGGTGATGTCACCGCCCCGC < 5:126880/148‑1 AACGACGCCTGCAGTGTCGCGCTGATCGCCGATGCGCAACTCGCCCAGGCGTTTCTGGCCCGCAGGCAGTAGGTACCTGCGTTACGCTTGATCGTGACCTTGGGCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGG < 6:124751/149‑1 GCCTGCAGTGTCGCGCTGATCGCCGATGCGCAACTCGCCCAGGCGTTGCTGGCCCGCAGGCAGGAGGTACCTGCGTTACGCTTGATCGTGACCTTGGGCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGGTCACGA < 1:53006/149‑1 CGCCGATGCGCAACTCGCCCAGGCGTTGCTGGCCCGCAGGCAGGAGGTACCTGCGTTACGCTTGATCGTGACCTTGGGCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGG < 8:188015/123‑1 CGCCGATGCGCAACTCGCCCAGGCGTTGCTGGCCCGCAGGCAGGAGGTACCTGCGTTACGCTTGATCGTGACCTTGGGCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGG > 7:188015/1‑123 CCTTGGGCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGGTCACGATCAAGCGTAACGCAGGTACCTCCTGCCTGCGGGCCAGCAACGCCTGGGCGAGTTGCGCATCGGCGATCAGCGCGACACTGCAGGCGTCGTT < 6:199228/149‑1 CCTTGGGCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGGTCACGATCAAGCGTAACGCAGGTACCTCCTGCCTGCGGGCCAGCAACGCCTGGGCGAGTTGCGCATCGGCGATCAGCGCGACA < 1:314451/135‑1 CCTTGGGCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGGTCACGATCAAGCGTAACGCAGGTACCTCCTGCCTGCGGGCCAGCAACGCCTGGGCGAGTTGCGCATCGGCGATCAGCGCGACA > 2:314451/1‑135 CCTTGGGCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGGTCACGATCAAGCGTAACGCAGGTACCTCCTGCCTGCGGGCCAGCAACGCCTGGGCGAGTTGC < 8:277613/114‑1 CCTTGGGCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGGTCACGATCAAGCGTAACGCAGGTACCTCCTGCCTGCGGGCCAGCAACGCCTGGGCGAGTTGC > 7:277613/1‑114 TTGGGCCAGCAGTGCGGCATAGGTGAAGTCACCGCCCCGCTCACCCAAGGTCACGATCAACCGTAACGCAGGTACCTCCTGCCTGCGGGCCAGCAACGCCTGGGCGAGTTGCGCATCGGCGAGCCGCCCGACACTCCACGCGTCCTTGA > 4:311677/1‑149 GGGCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGGTCACGATCAAGCGTAACGCAGGTACCTCCTGCCTGCGGGCCAGCAACGCCTGGGCGAGTTGCGCATCGGCGATCAGCGCGACACTGCAGGCGTCGTTGAG < 2:124525/148‑1 GGCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGGTCACGATCAAGCGTAACGCAGGTACCTCCTGCCTGCGGGCCAGCAACGCCTGGGCGAGTTGCGCATCGGCGATCAGCGCGACACTGCAGGCGTCGTTGAGC < 5:119981/148‑1 GGCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGGTCACGATCAAGCGTAACGCAGGTACCTCCTGCCTGCGGGCCAGCAACGCCTGGGCGAGTTGCGCATCGGCGATCAGCGCGACACTGCAGGCGTCGTTGAGC < 2:265425/148‑1 GCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGGTCACGATCAAGCGTAACGCAGGTACCTCCTGCCTGCGGGCCAGCAACGCCTGGGCGAGTTGCGCAGCGGCGATCAGCGCGACACTGCAGGCGTCGTTGAGCAC < 4:4679/149‑1 AGGTACCGGTCAATGCGCGCCTGGCACCGGATGAAGTGATTCAGGTGCTCAACGACGCCTGCAGTGTCGCGCTGATCGCCGATGCGCAACTCGCCCAGGCGTTGCTGGCCCGCAGGCAGGAGGTACCTGCGTTACGCTTGATCGTGACCTTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2316429‑2316582‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgggCCAGCAGTGCGGCATAGGTGATGTCACCGCCCCGCTCACCCAAGGTCACGATCAAGCGTAACGCAGGTACCTCCTGCCTGCGGGCCAGCAACGCCTGGGCGAGTTGCGCATCGGCGATCAGCGCGACACTGCAGGCGTCGTTGAGCAC < NC_002947/2316620‑2316473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |