| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2943820 = | 36 (0.640) | 4 (0.070) | 4/246 | NT | 8.8% | coding (249/1641 nt) | PP_2577 | paraquat‑inducible protein B |
| ? | NC_002947 | 2943854 = | 49 (0.910) | coding (283/1641 nt) | PP_2577 | paraquat‑inducible protein B | |||||
ACTGCCCGAAAGCAGCGTGTCCACCCCGGAAACCCCGCCCACGCCGATGCGCGGTCGCACCACCCAGAAGCGCGCTCCCCGGGTAGCGAATGAACGGGCATCGTTGGAGAGCTGAACCTTGGCCACCACGCTCTTCTTGTCGTCGGCCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2943970‑2943820‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaagGTTCAGCTCTCCAACGATGCCCGTTCATTCGCTACCCGGGGAGCGCGCTTCTGGGTGGTGCGACCGCGCATCGGCGTGGGCGGGGTTTCCGGGGTGGACACGCTGCTTTCGGGCAGTTTCATCGGGGCTGATTCCGGCGAGTCG > NC_002947/2943854‑2943997 ACTGCCCGAAAGCAGCGTGTCCACCCCGGAAACCCCGCCCACGCCGATGCGCGGTCGCACCACCCAGAAGCGCGCTCCCCGGGTAGCGAATGAACGGGCATCGTTGGAGAGCTGAACCTTGGCCACCACGCTCTTCTTGTCGTCGGCC > 4:187493/1‑148 CCCGAAAGCAGCGTGTCCACCCCCGAAACCCCGCCCACGCCGATGCGCGGTCGCACCACCCAGAAGCGCGCTCCCCGGGTAGCGAATGAACGGGCATCGTTGGAGAGCTGAACCTTAGCCACCACGCTCTTCTTGTCGTCGGCCAAGac > 6:256187/1‑147 CACCCCGGAAACCCCGCCCACGCCGATGCGCGGTCGCACCACCCAGAAGCGCGCTCCCCGGGTAGCGAATGAACGGGCATCGTTGGAGAGCTGAACCTTGGCCACCACGCTCTTCTTGTCGTCGGCCA < 3:344975/128‑1 CACCCCGGAAACCCCGCCCACGCCGATGCGCGGTCGCACCACCCAGAAGCGCGCTCCCCGGGTAGCGAATGAACGGGCATCGTTGGAGAGCTGAACCTTGGCCACCACGCTCTTCTTGTCGTCGGCCA > 4:344975/1‑128 CCCCGGAAACCCCGCCCACGCCGATGCGCGGTCGCACCACCCAGAAGCGCGCTCCCCGGGTAGCGAATGAACGGGCATCGTTGGAGAGCTGAACCTTGGCCACCACGCTCTTCTTGTCGTCG > 5:159265/1‑122 CCCCGGAAACCCCGCCCACGCCGATGCGCGGTCGCACCACCCAGAAGCGCGCTCCCCGGGTAGCGAATGAACGGGCATCGTTGGAGAGCTGAACCTTGGCCACCACGCTCTTCTTGTCGTCG < 6:159265/122‑1 TGAACCTTGGCCACCACGCTCTTCTTGTCGTCGGCCAAGGTTCAGCTCTCCAACGATGCCCGTTCATTCGCTACCCGGGGAGCGCGCTTCTGGGTGGTGCGACCGCGCATCGGCGTGGGCGGGGTTTCCGGGGTGGACACGCTGCTTTC > 3:143448/1‑149 AACCTTGGCCACCACGCTCTTCTTGTCGTCGGCCAAGGTTGAGCTCTCCAACGATGCCCGTTCATTCGCTACCCGGGGAGCGCGCTTCTGGGTGGTGCGACCGCGCATCGGCGTGGGCGGGGTTTCCGGGGT < 2:265714/132‑1 AACCTTGGCCACCACGCTCTTCTTGTCGTCGGCCAAGGTTCAGCTCTCCAACGATGCCCGTTCATTCGCTACCCGGGGAGCGCGCTTCTGGGTGGTGCGACCGCGCATCGGCGTGGGCGGGGTTTCCGGGGT > 1:265714/1‑132 CTTGTCGTCGGCCAAGGTTCAGCTCTCCAACGATGCCCGTTCATTCGCTACCCGGGGAGCGCGCTTCTGGGTGGTGCGACCGCGCATCGGCGTGGGCGGGGTTTCCGGGGTGGACACGCTGCTTTCGGGCAGTTTCATCGGGGCTGA < 4:143448/147‑1 GCCAAGGTTCAGCTCTCCAACGATGCCCGTTCATTCGCTACCCGGGGAGCGCGCTTCTGGGTGGTGCGACCGCGCATCGGCGTGGGCGGGGTTTCCGGGGTGGACACGCTGCTTTCGGGCAGTTTCATCGGGGCTGATTCCGGCGAGTC > 3:67830/1‑149 CAAGGTTCAGCTCTCCAACGATGCCCGTTCATTCGCTACCCGGGGAGCGCGCTTCTGGGTGGTGCGACCGCGCATCGGCGTGGGCGGGGTTTCCGGGGTGGACACGCTGCTTTCGGGCAGTTTCATCGGGGCTGATTCCGGCGAGTag > 4:288585/1‑146 ACTGCCCGAAAGCAGCGTGTCCACCCCGGAAACCCCGCCCACGCCGATGCGCGGTCGCACCACCCAGAAGCGCGCTCCCCGGGTAGCGAATGAACGGGCATCGTTGGAGAGCTGAACCTTGGCCACCACGCTCTTCTTGTCGTCGGCCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2943970‑2943820‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaagGTTCAGCTCTCCAACGATGCCCGTTCATTCGCTACCCGGGGAGCGCGCTTCTGGGTGGTGCGACCGCGCATCGGCGTGGGCGGGGTTTCCGGGGTGGACACGCTGCTTTCGGGCAGTTTCATCGGGGCTGATTCCGGCGAGTCG > NC_002947/2943854‑2943997 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |