| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2961033 = | 44 (0.780) | 7 (0.130) | 7/250 | NT | 14.5% | coding (159/2316 nt) | PP_2590 | ferric siderophore receptor |
| ? | NC_002947 | 2961073 = | 40 (0.730) | coding (119/2316 nt) | PP_2590 | ferric siderophore receptor | |||||
CATTTGCCTTACTTCTTCGCTTTTTAAATGCAAAAACACAACCCGCCATCTGTCCCTCTGGAGCCATCGCGTGTCCATCCGTACCTTGCACACACTCTCGTCCCCTGCCCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2961183‑2961033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATTTAAAAAGCGAAGAAGTAAGGC > NC_002947/2961073‑2961178 CATTTGCCTTACTTCTTCGCTTTTTAAATGCAAAAACACAACCCGCCATCTGTCCCTCTGGAGCCATCGCGTGTCCATCCGTACCTTGCACACACTCTCGTCCCCTGCCCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATG > 1:341455/1‑149 ATTTGCCTTACTTCTTCGCTTTTTAAATGCAAAAACACAACCCGCCATCTGTCCCTCTGGAGCCATCGCGTGTCCATCCGTACCTTGCACACACTCTCGTCCCCTGCCCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGC < 3:6265/149‑1 ATTTGCCTTACTTCTTCGCTTTTTAAATGCAAAAACACAACCCGCCATCTGTCCCTCTGGAGCCATCGCGTGTCCATCCGTACCTTGCACACACTCTCGTCCCCTGCCCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGC < 5:344000/149‑1 TTTGCCTTACTTCTTCGCTTTTTAAATGCAAAAACACAACCCGCCATCTGTCCCTCTGGAGCCATCGCGTGTCCATCAGTACCTTGCACACACTCTCGTCCCCTGCCATGGCATTGCCTGCGATGCCGCGCACCCCGCTGGCACATGCC > 3:215298/1‑149 GGAGCCATCGCGTGTCCATCCGTACCTTGCACACACTCTCGTCCCCTGCCCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACAT > 2:32299/1‑89 GGAGCCATCGCGTGTCCATCCGTACCTTGCACACACTCTCGTCCCCTGCCCTGGCATTCCCTGCGCTGCCGCGCACCCCGCTGGCACAT < 1:32299/89‑1 CCTGCCCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCCAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATT > 3:274055/1‑133 CCTGCCCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCCAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATT < 4:274055/133‑1 CCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCCAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATTTAAAAAGCGAAGAAGTAAGG > 4:247085/1‑148 CTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCCAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGAGAGATGGCGGGTTGTGTTTTTGGATTTAAAAAGCGAAGAAGTAAGGC > 8:331464/1‑148 TGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCCAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATTTAAAAA > 1:5369/1‑132 TGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCCAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATTTAAAAA < 2:5369/132‑1 GCGCTGCCGCGCACCCCGCTGGCA‑ATGCCAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGG > 8:275757/1‑86 CATTTGCCTTACTTCTTCGCTTTTTAAATGCAAAAACACAACCCGCCATCTGTCCCTCTGGAGCCATCGCGTGTCCATCCGTACCTTGCACACACTCTCGTCCCCTGCCCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2961183‑2961033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATTTAAAAAGCGAAGAAGTAAGGC > NC_002947/2961073‑2961178 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |