| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2982157 = | 46 (0.810) | 4 (0.070) | 4/250 | NT | 7.4% | coding (208/1734 nt) | PP_2607 | hypothetical protein |
| ? | NC_002947 | 2982210 = | 56 (1.030) | coding (155/1734 nt) | PP_2607 | hypothetical protein | |||||
TTTCTGGCGGCGCGGTGTGGCTGTACGGCACCGACCAAGCCCGTGACGCCGGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2982213‑2982157‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaGAAATCGCCGAGGTGCCGCCAAAGCGTTCGGCTTTTTCCACCACCAGCACCTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGA > NC_002947/2982210‑2982356 TTTCTGGCGGCGCGGTGTGGCTGTACGGCACCGACCAAGCCCGTGACGCCGGCGCCAGAAATCGCCGAGGTGCCGCCAAAGCGTTCGGCTTTTTCCACCACCAGCACCTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGC > 5:174308/1‑140TTTCTGGCGGCGCGGTGTGGCTGTACGGCACCGACCAAGCCCGTGACGCCGGCGCCAGAAATCGCCGAGGTGCCGCCAAAGCGTTCGGCTTTTTCCACCACCAGCACCTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGC < 6:174308/140‑1 TGGCGGCGCGGTGTGGCTGTACGGCACCGACCAAGCCCGTGACGCCGGCGCCAGAAATCGCCGAGGTGCCGCCAAAGCGTTCGGCTTTTTCCACCACCAGCACCTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCG > 4:63166/1‑149 CTGTACGGCACCGACCAAGCCCGTGACGCCGGCGCCAGAAATCGCCGAGGTGCCGCCAAAGCGTTCGGCTTTTTCCACCACCAGCACCTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCA < 3:63166/149‑1 GCCAGAAATCGCCGAGGTGCCGCCAAAGCGTTCGGCTTTTTCCACCACCAGCACCTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCA < 1:62117/149‑1 CAGAAATCGCCGAGGTGCCGCCAAAGCGTTCGGCTTTTTCCACCACCAGCACCTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGA < 3:222355/149‑1 CAGAAATCGCCGAGGTGCCGCCAAAGCGTTCGGCTTTTTCCACCACCAGCACCTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGA < 8:168852/149‑1 AGAAATCGCCGAGGTGCCGCCAAAGCGTTCGGCTTTTTCCACCACCAGCACCTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAG > 1:133084/1‑120 AGAAATCGCCGAGGTGCCGCCAAAGCGTTCGGCTTTTTCCACCACCAGCACCTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAG < 2:133084/120‑1 TTTCTGGCGGCGCGGTGTGGCTGTACGGCACCGACCAAGCCCGTGACGCCGGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2982213‑2982157‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaGAAATCGCCGAGGTGCCGCCAAAGCGTTCGGCTTTTTCCACCACCAGCACCTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGA > NC_002947/2982210‑2982356 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |