| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2992621 = | 48 (0.850) | 4 (0.070) | 4/248 | NT | 8.3% | coding (452/870 nt) | PP_2616 | hypothetical protein |
| ? | NC_002947 | 2992664 = | 43 (0.800) | coding (409/870 nt) | PP_2616 | hypothetical protein | |||||
GCAGCCAGATCGACAACATTCAGGAAGAAATGCGCCAGCACGGTTACGAGCCGGCTCAGTTGCTGGCGTACTCCTACGGTCTGTGCCTGTTCATAGACGAGGCCGTTATGGAGCGGCCCTGGGGCAAGAGCAGCTGCTGGAGCCAGGAGCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2992774‑2992621‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgctCCATAACGGCCTCGTCTATGAACAGGCACAGACCGTAGGAGTACGCCAGCAACTGAGCCGGCTCGTAACCGTGCTGGCGCATTTCTTCCTGAATGTTGTCGATCTGGCTGCGTACTTGCTGGTGCACGTCCTGGATGTTCGGCAGCTC > NC_002947/2992664‑2992811 GCAGCCAGATCGACAACATTCAGGAAGAAATGCGCCAGCACGGTTACGAGCCGGCTCAGTTGCTGGCGTACTCCTACGGTCTGTGCCTGTTCATAGACGAGGCCGTTATGGAGCGGCCCTGGGGCAAGAGCAGCTGCTGGAGCCAGGAG > 6:177772/1‑149 CAGCCAGATCGACAACATTCAGGAAGAAATGCGCCAGCACGGTTACGAGCCGGCTCAGTTGCTGGCGTACTCCTACGGTCTGTGCCTGTTCATAGACGAGGCCGTTATGGAGCGGCCCTGGGGCAAGAGCAGCTGCTGGAGCCAGGAGC < 6:187370/149‑1 GGAGCGGCCCTGGGGCAAGAGCAGCTGCTGGAGCCAGGAGCCGCTCCATAACGGCCTCGTCTATGAACAGGCACACACCGTAGGAGTACGCCAGCAACTCAGCCGGCTCGTAACCGTGCTGGCGCATTTCTTCATCAATGATGAAGATC > 6:286410/1‑149 GGCCCTGGGGCAAGAGCAGCTGCTGGAGCCAGGAGCCGCTCCATAACGGCCTCGTCTATGAACAGGCACAGACCGTAGGAGTACGCCAGCAACTGAGCCGGCTCGTAACCGTGCTGGCGCATTTCTTCCTGAATGTTGTCGATCTGGCT > 5:261142/1‑149 CAGCTGCTGGAGCCAGGAGCCGCTCCATAACGGCCTCGTCTATGAACAGGCACAGACCGTAGGAGTACGCCAGCAACTGAGCCGGCTCGTAACCGTGCTGGCGCATTTCTTCCTGAATGTTGTCGATCTGGCTGCGTACTTGCTGGTGC < 6:261142/149‑1 AGCCAGGAGCCGCTCCATAACGGCCTCGTCTATGAACAGGCACAGACCGTAGGAGTACGCCAGCAACTGAGCCGGCTCGTAACCGTGCTGGCGCATTTCTTCCTGAATGTTGTCGATCTGGCTGCGTACTTGCTGGTGCACGTCCTGGA < 5:286410/149‑1 TCCATAACGGCCTCGTCTATGAACAGGCACAGACCGTAGGAGTACGCCAGCAACTGAGCCGGCTCGTAACCGTGCTGGCGCATTTCTTCCTGAATGTTGTCGATCTGGCTGCGTACTTGCTGGTGCACGTCCTGGATGTTCGGCAGCTC > 3:144766/1‑149 GCAGCCAGATCGACAACATTCAGGAAGAAATGCGCCAGCACGGTTACGAGCCGGCTCAGTTGCTGGCGTACTCCTACGGTCTGTGCCTGTTCATAGACGAGGCCGTTATGGAGCGGCCCTGGGGCAAGAGCAGCTGCTGGAGCCAGGAGCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2992774‑2992621‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgctCCATAACGGCCTCGTCTATGAACAGGCACAGACCGTAGGAGTACGCCAGCAACTGAGCCGGCTCGTAACCGTGCTGGCGCATTTCTTCCTGAATGTTGTCGATCTGGCTGCGTACTTGCTGGTGCACGTCCTGGATGTTCGGCAGCTC > NC_002947/2992664‑2992811 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |