| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3143950 = | 46 (0.810) | 3 (0.060) | 3/246 | NT | 6.5% | coding (874/1539 nt) | rbsA‑II | ribose ABC transporter ‑ ATP‑binding subunit |
| ? | NC_002947 | 3143991 = | 43 (0.800) | coding (915/1539 nt) | rbsA‑II | ribose ABC transporter ‑ ATP‑binding subunit | |||||
CGCCTTGCCGACGGCGCTCCTCGGGCATCAGCGCGACGCCCTGGGCGACAGCCTCGCGCGGACTGCGCAAGGACAACGGTTGCCCGTCCAGGCGCACCTCGCCGCTGTCCGGTGGCGCCAGGCCGAACAGGCTGCGTAGCAACTCCTTGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3144103‑3143950‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgccACCGGACAGCGGCGAGGTGCGCCTGGACGGGCAACCGTTGTCCTTGCGCAGTCCGCGCGAGGCTGTCGCCCAGGGCGTCGCGCTGATGCCCGAGGAGCGCCGTCGGCAAGGCGTGGCGCTTGATCTGAGCGTGCAGGAGAACACCACC > NC_002947/3143991‑3144138 CGCCTTGCCGACGGCGCTCCTCGGGCATCAGCGCGACGCCCTGGGCGACAGCCTCGCGCGGACTGCGCAAGGACAACGGTTGCCCGTCCAGGCGCACCTCGCCGCTGTCCGGTGGCGCCAGGCCGAACAGGCTGCGTAGCAACTCCTTG < 1:279564/149‑1CGCCTTGCCGACGGCGCTCCTCGGGCATCAGCGCGACGCCCTGGGCGACAGCCTCGCGCGGACTGCGCAAGGACAACGGTTGCCCGTCCAGGCGCACCTCGCCGCTGTCCGGTGGCGCCAGGCCGAACAGGCTGCGTAGCAACTCCTTG < 2:104135/149‑1CGCCTTGCCGACGGCGCTCCTCGGGCATCAGCGCGACGCCCTGGGCGACAGCCTCGCGCGGACTGCGCAAGGACAACGGTTGCCCGTCCAGGCGCACCTCGCCGCTGTCCGGTGGCGCCAGGCCGAACAGGCTGCGTAGCAACTCCTTG < 8:6523/149‑1 TTGCCGACGGCGCTCCTCGGGCATCAGCGCGACGCCCTGGGCGACAGCCTCGCGCGGACTGCGCAAGGACAACGGTTGCCCGTCCAGGCGCACCTCGCCGCTGTCCGGTGGCGCCAGGCCGAACAGGCTGCGTAGCAACTCCTTGGCGC > 3:50608/1‑149 TTGCCGACGGCGCTCCTCGGGCATCAGCGCGACGCCCTGGGCGACAGCCTCGCGCGGACTGCGCAAGGACAACGGTTGCCCGTCCAGGCGCACCTCGCCGCTGTCCGGTGGCGCCAGGCCGAACAGGCTGCGTAGCAACTCCTTGGCGC > 5:284202/1‑149 TGCCGACGGCGCTCCTCGGGCATCAGCGCGACGCCCTGGGCGACAGCCTCGCGCGGACTGCGCAAGGACAACGGTTGCCCGTCCAGGCGCACCTCGCCGCTGTCCGGTGGCGCCAGGCCGAACAGGCTGCGTAGCAACTCCTTGGCGCC > 4:66592/1‑149 GGTGGCGCCAGGCCGAACAGGCTGCGTAGCAACTCCTTGGCGCCACCGGACAGCGGCGAGGTGCGCCTGGACGGGCAACCGTTGTCCTTGCGCAGTCCGCGCGAGGCTGTCGCCCAGGGCGTCGCGCTGATGCCCGAGGAGCGCCGTCG > 8:293596/1‑149 GTGGCGCCAGGCCGAACAGGCTGCGTAGCAACTCCTTGGCGCCACCGGACAGCGGCGAGGTGCGCCTGGACGGGCAACCGTTGTCCTTGCGCAGTCCGCGCGAGGCTGTCGCCCAGGGCGTCGCGCTGATGC < 3:181503/132‑1 GTGGCGCCAGGCCGAACAGGCTGCGTAGCAACTCCTTGGCGCCACCGGACAGCGGCGAGGTGCGCCTGGACGGGCAACCGTTGTCCTTGCGCAGTCCGCGCGAGGCTGTCGCCCAGGGCGTCGCGCTGATGC > 4:181503/1‑132 GCGCCACCGGACAGCGGCGAGGTGCGCCTGGACGGGCAACCGTTGTCCTTGCGCAGTCCGCGCGAGGCTGTCGCCCAGGGCGTCGCGCTGATGCCCGAGGAGCGCCGTCGGCAAGGCGTGGCGCTTGATCTGAGCGTGCAGGAGAAC < 3:299396/147‑1 GCCACCGGACAGCGGCGAGGTGCGCCTGGACGGGCAACCGTTGTCCTTGCGCAGTCCGCGCGAGGCTGTCGCCCAGGGCGTCGCGCTGATGCCCGAGGAGCGCCGTCGGCAAGGCGTGGCGCTTGATCTGAGCGTGCAGGAGAACACCA < 8:148780/149‑1 CACCGGACAGCGGCGAGGTGCGCCTGGACGGGCAACCGTTGTCCTTGCGCAGTCCGCGCGAGGCTGTCGCCCAGGGCGTCGCGCTGATGCCCGAGGAGCGCCGTCGGCAAGGCGTGGCGCTTGATCTGAGCGTGCAGGAGAACACCACC > 1:333868/1‑149 CGCCTTGCCGACGGCGCTCCTCGGGCATCAGCGCGACGCCCTGGGCGACAGCCTCGCGCGGACTGCGCAAGGACAACGGTTGCCCGTCCAGGCGCACCTCGCCGCTGTCCGGTGGCGCCAGGCCGAACAGGCTGCGTAGCAACTCCTTGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3144103‑3143950‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgccACCGGACAGCGGCGAGGTGCGCCTGGACGGGCAACCGTTGTCCTTGCGCAGTCCGCGCGAGGCTGTCGCCCAGGGCGTCGCGCTGATGCCCGAGGAGCGCCGTCGGCAAGGCGTGGCGCTTGATCTGAGCGTGCAGGAGAACACCACC > NC_002947/3143991‑3144138 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |