New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3487111	50 (0.880)	3 (0.060)	3/246	NT	5.9%	coding (900/1344 nt)	PP_3093	hypothetical protein
	?	NC_002947	= 3487143	48 (0.900)					coding (868/1344 nt)	PP_3093	hypothetical protein

GGCGATATAGAAGTCGGCTTCGGCCAGGCGCGGGTCGTGCAGTTGGCCTTGCCAGTGCGATGGCTTGGTCTGGGTCAGGTTGATGACAATGCACTGGTTGGGCACGACGTTGTCGAGCATCACCCGGATCATTTCGTCGAGCTTGACCAGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3486958‑3487111 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgacATCCCCGAGTACGACCACCACGACCCGGCCGCGTCGCTGGTCAAGCTCGACGAAATGATCCGGGTGATGCTCGACAACGTCGTGCCCAACCAGTGCATTGTCATCAACCTGACCCAGACCAAGCCATCGCACTGGCAAGGCCAACTGC  <  NC_002947/3487143‑3486996                                                                                                                                                                                                                                                                                                                GGCGATATAGAAGTCGGCTTCGGCCAGGCGCGGGTCGTGCAGTTGGCCTTGCCAGTGCGATGGCTTGGTCTGGGTCAGGTTGATGACAATGCACTGGTTGGGCACGACGTTGTCGAGCATCACCCGGATCATTTCGTCGAGCTTGACCA                                                                                                                                                           <  4:70148/149‑1    GATATAGTAGTCGGCTTCGTCCAGGCGCGGGTCGTGCAGTTGGGCTTGCCAGTGCGATGGCTTGGTCTGGGTCAGGTTGATGACAATGCACTGGTTGGGCACGACGTTGTCGAGCATCACCCGGATCATTTCGTCTAGCTTGACCAGCG                                                                                                                                                        <  3:326760/149‑1                                                CTTGCCAGTGCGATGGCTTGGTCTGGGTCAGGTTGATGACAATGCACTGGTTGGGCACGACGTTGTCGAGCATCACCCGGATCATTTCGTCGAGCTTGACCAGCGACATCCCCGAGTACGACCACCACGACCCGGCCGCGTCGCTGGTa                                                                                                            >  4:261487/1‑148                                                                           TCAGGTTGATGACAATGCACTGGTTGGGCACGACGTTGTCGAGCATCACCCGGATCATTTCGTCGAGCTTGACCAGCGACATCCCCGAGTACGACCACCACGACCCGGCCGCGTCGCTG                                                                                                               >  3:193713/1‑119                                                                           TCAGGTTGATGACAATGCACTGGTTGGGCACGACGTTGTCGAGCATCACCCGGATCATTTCGTCGAGCTTGACCAGCGACATCCCCGAGTACGACCACCACGACCCGGCCGCGTCGCTG                                                                                                               <  4:193713/119‑1                                                                                                                                                    CAGCGACATCCCCGAGTACGACCACCACGACCCGGCCGCGTCGCTGGTCAAGCTCGACGAAATGATCCGGGTGATGCTCGACAACGTCGTGCCCAACCAGTGCATTGTCATCAACCTGACCCAGACCAAGCCATCGCACTGGCAAGGC         >  3:224902/1‑148                                                                                                                                                     AGCGACATCCCCGAGTACGACCACCACGACCCGGCCGCGTCGCTGGTCAAGCTCGACGAAATGATCCGGGTGATGCTCGACAACGTCGTGCCCAACCAGTGCATTGTCATCAACCTGACCCAGACCAAGCCATCGCACTGGCAAGGC         <  4:197839/147‑1                                                                                                                                                      GCGACATCCCCGAGTACGACCACCACGACCCGGCCGCGTCGCTGGTCAAGCTCGACGAAATGATCCGGGTGATGCTCGACAACGTCGTGCCCAACCAGTGCATTGTCATCAACCTGACCCAGACCAAGCCATCGCACTGGCAAGGCCAA      <  4:224902/149‑1                                                                                                                                                      GCGACATCCCCGAGTACGACCACCACGACCCGGCCGCGTCGCTGGTCAAGCTCGACGAAATGATCCGGGTGATGCTCGACAACGTCGTGCCCAACCAGTGCATTGTCATCAACCTGACCCAGACCAAGCCATCGCACTGGCAAGGCCAA      <  8:231861/149‑1                                                                                                                                                         ACATCCCCGAGTACGACCACCACGACCCGGCCGCGTAGCTGGTCAAGCTCGACGAAATGATCCGGGTGATGCTCGACAACGTCGTGCCCAACCAGTGCATTGTCATCAACCTGCCCCAGCCCAACCCATCGCCCTGGCAAGGCCAACag   >  5:262309/1‑147                                                                                                                                                          CATCCCCGAGTCCGACCACCACGACCCGGCCTCGTCGATGGTCAAGCTCGCCGAAATGATCCGGGTGATGCTCGACAACGTCGTGCCCAACCAGTGCATTGTCATCAACCTGACCCAGCCCAAGCAATCGCACTGGCAAGGCCAACT    <  6:10183/147‑1                                                                                                                                                          CATCCCCGAGTACGACCACCACGACCCGGCCGCGTCGCTGGTCAAGCTCGACGAAATGATCCGGGTGATGCTCGACAACGTCGTGCCCAACCAGTGCATTGTCATCAACCTGACCCAGACCAAGCCATCGCACTGGCAAGGCCAACTGC  <  8:215095/149‑1                                                                                                                                                                                                                                                                                                                GGCGATATAGAAGTCGGCTTCGGCCAGGCGCGGGTCGTGCAGTTGGCCTTGCCAGTGCGATGGCTTGGTCTGGGTCAGGTTGATGACAATGCACTGGTTGGGCACGACGTTGTCGAGCATCACCCGGATCATTTCGTCGAGCTTGACCAGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3486958‑3487111 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgacATCCCCGAGTACGACCACCACGACCCGGCCGCGTCGCTGGTCAAGCTCGACGAAATGATCCGGGTGATGCTCGACAACGTCGTGCCCAACCAGTGCATTGTCATCAACCTGACCCAGACCAAGCCATCGCACTGGCAAGGCCAACTGC  <  NC_002947/3487143‑3486996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.