| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3622943 = | 54 (0.950) | 4 (0.070) | 4/250 | NT | 7.0% | coding (1110/1344 nt) | PP_3194 | hypothetical protein |
| ? | NC_002947 | 3623009 = | 55 (1.010) | coding (1044/1344 nt) | PP_3194 | hypothetical protein | |||||
CGACAGCGGCTTTGCTGTCACACCCTATGGCGAATGGCACGCTCGCGAACTGGAGCTGCTGGTACGGCATCTGGACTTCACCCCGGCCGAAGCGTTATTCGCCGCAACCCATGTCGGCGCACGCTTGATGCCGCGCGGCGAGACGCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3623093‑3622943‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATAGGGTGTGACAGCAAAGCCGCTGTCGCTGCCGCAGGCGAAGGGTACGCCGGCGGCCTTGGCACGCTTGAGTACCGGCGCGCCGA > NC_002947/3623009‑3623151 ctACAGCGGCTTTGCTGTCACACCCTATGGCGAATGGCACGCTCGCGAACTGGAGCTGCTGGTACGGCATCTGGACTTCACCCCGGCCGAAGCGTTATTCGCCGCAACCCATGTCGGCGCACGCTTGATGCCGCGCGGCGAGACGCTCG < 4:355155/147‑1 ACAGCGGCTTTGCTGTCACACCCTATGGCGAATGGCACGCTCGCGAACTGGAGCTGCTGGTACGGCATCTGGACTTCACCCCGGCCGAAGCGTTATTCGCCGCAACCCATGTCGGCGCACGCTTGATGCCGCGCGGCGAGACGCTCGG > 4:259165/1‑148 CGAATGGCACGCTCGCGAACTGGAGCTGCTGGTACGGCATCTGGACTTCACCCCGGCCGAAGCGTTATTCGCCGCAACCCATGTCGGCGCACGCTTGATGCCGCGCGGCGAGACGCTCGG < 1:264911/120‑1 CGAATGGCACGCTCGCGAACTGGAGCTGCTGGTACGGCATCTGGACTTCACCCCGGCCGAAGCGTTATTCGCCGCAACCCATGTCGGCGCACGCTTGATGCCGCGCGGCGAGACGCTCGG > 2:264911/1‑120 GCCGAAGCGTTATTCGCCGCAACCCATGTCGGCGCACGCTTGATGCCGCGCGGCGAGACGCTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATAGGGTGTGACAGCAAAGCCGCTGT > 6:367045/1‑149 CCGAAGCGTTATTCGCCGCAACCCATGTCGGCGCACGCTTGATGCCGCGCGGCGAGACGCTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATAGGGTGTGACAGCAAAGCCGCTGTC > 3:1807/1‑149 GCAACCCATGTCGGCGCACGCTTGATGCCGCGCGGCGAGACGCTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATAGGGTGTGACAGCAAAGCCGCTGTCGCTGCCGCAGGCGAAGG < 4:1807/149‑1 ATGTCGGCGCACGCTTGATGCCGCGCGGCGAGACGCTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATAGGGTGTGACAGCAAAGCCGCTGTCGCTGCCGCAGGCGAAGGGTACGCC < 5:367045/149‑1 CGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATAGGGTGTGACAGCAAAGCCGCTGTCGCTGCCGCAGGCGAAGGGTACGCCGGCGGCCTTGGCACGCTTGAGTACCGGCGCGCCGA < 3:60492/147‑1 CGACAGCGGCTTTGCTGTCACACCCTATGGCGAATGGCACGCTCGCGAACTGGAGCTGCTGGTACGGCATCTGGACTTCACCCCGGCCGAAGCGTTATTCGCCGCAACCCATGTCGGCGCACGCTTGATGCCGCGCGGCGAGACGCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3623093‑3622943‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATAGGGTGTGACAGCAAAGCCGCTGTCGCTGCCGCAGGCGAAGGGTACGCCGGCGGCCTTGGCACGCTTGAGTACCGGCGCGCCGA > NC_002947/3623009‑3623151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |