New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3622943 =54 (0.950)4 (0.070) 4/250 NT 7.0% coding (1110/1344 nt) PP_3194 hypothetical protein
?NC_002947 3623009 = 55 (1.010)coding (1044/1344 nt) PP_3194 hypothetical protein

GGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATAGGGTGTGACAGCAAAGCC  >  NC_002947/3622797‑3623086
                                                                                                                                                  |                                                                                                                                                    
gggTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGcc                                                                                                                                                    <  6:115960/149‑1 (MQ=255)
   tcggcgcgccggtactcaagcgtgccaaggccgccggcgtacccttcgcctgcggcagcgacagcggctttgctgtcacaccctatggcgaatggcacgctcgcgaactggagctgctggtacggcatctggacttcaccccgGCCg                                                                                                                                                   <  3:60492‑M1/4‑1 (MQ=255)
     gTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCg                                                                                                                                               >  3:147961/1‑149 (MQ=255)
            gTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAg                                                                                                                                                 >  4:298703/1‑140 (MQ=255)
            gTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAg                                                                                                                                                 <  3:298703/140‑1 (MQ=255)
                 ttGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTGCCAGGGTGCCGAGCGTCTCGCcgcgcg                                                                                                                                   <  3:306220/149‑1 (MQ=255)
                  tGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCgg                                                                                                                                  >  7:34562/1‑149 (MQ=255)
                     aGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCAt                                                                                                                               >  5:272833/1‑149 (MQ=255)
                         gTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAg                                                                                                                           >  5:170983/1‑149 (MQ=255)
                           aCCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGATGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCg                                                                                                                         >  7:175874/1‑149 (MQ=255)
                               tcTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCTGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTgcg                                                                                                                     >  6:247442/2‑149 (MQ=255)
                               gCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTgcg                                                                                                                     <  5:106428/149‑1 (MQ=255)
                                      ggcgtacccttcgcctgcggcagcgacagcggctttgctgtcacaccctatggcgaatggcacgctcgcgaactggagctgctggtacggcatctggacttcaccccgGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACAt                                                                                                              <  5:367045‑M1/41‑1 (MQ=255)
                                          ttGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGt                                                                                                          >  6:70687/1‑149 (MQ=255)
                                          ttGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGt                                                                                                          >  3:128802/1‑149 (MQ=255)
                                             tACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGGCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTgc                                                                                                       <  6:272833/149‑1 (MQ=255)
                                             ccttcgcctgcggcagcgacagcggctttgctgtcacaccctatggcgaatggcacgctcgcgaactggagctgctggtacggcatctggacttcaccccgGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTgc                                                                                                       <  4:1807‑M1/48‑1 (MQ=255)
                                              acacCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTgcg                                                                                                      >  4:52285/1‑149 (MQ=255)
                                               cacCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTgcgg                                                                                                     >  4:71657/1‑149 (MQ=255)
                                                         aGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGc                                                                                          <  3:71657/149‑1 (MQ=255)
                                                           ccGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑tt                                                                                      <  2:145920/149‑1 (MQ=255)
                                                           ccGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑tt                                                                                      >  1:145920/1‑149 (MQ=255)
                                                            cGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTc                                                                                     <  4:147961/149‑1 (MQ=255)
                                                              gacagcggctttgctgtcacaccctatggcgaatggcacgctcgcgaactggagctgctggtacggcatctggacttcaccccgGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCgg                                                                                  >  3:1807‑M1/85‑149 (MQ=255)
                                                               acagcggctttgctgtcacaccctatggcgaatggcacgctcgcgaactggagctgctggtacggcatctggacttcaccccgGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGc                                                                                 >  6:367045‑M1/84‑149 (MQ=255)
                                                                       ttGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTg                                                                          >  2:31483/1‑148 (MQ=255)
                                                                       ttGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTg                                                                          >  1:152968/1‑148 (MQ=255)
                                                                         gAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTg                                                                          <  6:170983/146‑1 (MQ=255)
                                                                          aaGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCg                                                                               <  7:43199/140‑1 (MQ=255)
                                                                          aaGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCg                                                                               >  8:43199/1‑140 (MQ=255)
                                                                            ggATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGGTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTcc                                                                   <  8:175874/149‑1 (MQ=255)
                                                                             gATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTc                                                                    >  6:280382/1‑147 (MQ=255)
                                                                               tGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTc                                                                    >  1:80669/1‑145 (MQ=255)
                                                                                         gtcCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTAcc                                                       <  5:280382/148‑1 (MQ=255)
                                                                                         gtcCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGCGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTAc                                                        >  7:135356/1‑147 (MQ=255)
                                                                                          tcCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTAcc                                                       <  4:237893/147‑1 (MQ=255)
                                                                                          tcCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTAcc                                                       >  3:237893/1‑147 (MQ=255)
                                                                                            cAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACcag                                                     >  3:259165/1‑147 (MQ=255)
                                                                                             aGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCggg                                                                             >  5:33543/1‑123 (MQ=255)
                                                                                             aGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCggg                                                                             <  6:33543/123‑1 (MQ=255)
                                                                                                 gCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTcc                                              <  2:80669/149‑1 (MQ=255)
                                                                                                  cGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCa                                             <  4:128802/149‑1 (MQ=255)
                                                                                                    aaCCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGa                                                                        >  6:202949/1‑120 (MQ=255)
                                                                                                    aaCCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGa                                                                        <  5:202949/120‑1 (MQ=255)
                                                                                                    aaCCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGt                                           <  3:187514/149‑1 (MQ=255)
                                                                                                     aCCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGTAAGTCCAGATGCCGTACCAGCAGCTCCAGt                                           <  1:31483/149‑1 (MQ=255)
                                                                                                         tCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTAACAGCAGCTCCGGTTcgc                                       >  6:249035/1‑148 (MQ=255)
                                                                                                           gAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGCGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGa                                     <  8:135356/148‑1 (MQ=255)
                                                                                                            aggaCCAGCAGGTCTGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGc                                   <  6:92197/146‑1 (MQ=255)
                                                                                                                   gcagGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCAt                            >  7:66557/1‑149 (MQ=255)
                                                                                                                     agGTCGGCCTGTTTGCCTGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTc                          <  5:247442/149‑1 (MQ=255)
                                                                                                                     agGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTc                          >  6:212291/1‑149 (MQ=255)
                                                                                                                       gTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGt                                 <  7:218990/140‑1 (MQ=255)
                                                                                                                       gTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGc                        >  1:78046/1‑149 (MQ=255)
                                                                                                                       gTCGGCATGTTTGCCCGGTTCCAGGGTCCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGAGAATAACGC‑‑TTCGGCCGGGGTGAAGACAAGATGCCGTACAACCAGCTCCAGTTCGCGAGCGTGACAtcgt                         >  8:218990/1‑145 (MQ=255)
                                                                                                                           gCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGGTGCGGCGAATAACGC‑‑TTCGGCCGGTGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATa                    <  8:34562/149‑1 (MQ=255)
                                                                                                                            ccTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATAg                   <  3:52285/149‑1 (MQ=255)
                                                                                                                            ccTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATAg                   <  5:70687/149‑1 (MQ=255)
                                                                                                                            ccTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATAg                   >  4:60492/1‑149 (MQ=255)
                                                                                                                                           ccAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATAGGGTGTGACAGCAAAg    >  6:29415/1‑149 (MQ=255)
                                                                                                                                                  gCCGAGCGTCTCGCCGCGCGGCATCAAGAGTGCGGCGACATGGTTTGCGGATAATACTCTCTTTTTGATCCTCGTTGAAATCCAGATGCCTTACCAGCATCTCGAGTTCGCGTGCGTGCCATTCGCCATAGGGTGTGACAGCAAAGcc  <  1:293679/148‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
GGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCCGACATGGGTTGCGGCGAATAACGC‑‑TTCGGCCGGGGTGAAGTCCAGATGCCGTACCAGCAGCTCCAGTTCGCGAGCGTGCCATTCGCCATAGGGTGTGACAGCAAAGCC  >  NC_002947/3622797‑3623086

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.