| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3678438 | 56 (0.990) | 3 (0.060) | 3/250 | NT | 5.2% | coding (1441/1569 nt) | PP_3242 | GGDEF domain‑containing protein |
| ? | NC_002947 | = 3678469 | 56 (1.030) | coding (1472/1569 nt) | PP_3242 | GGDEF domain‑containing protein | |||||
AGGAATTCACGCTGTTGCTGCCAGATACCGATGGCCGTGGCGCGGAACTGCTGGTGCAGGAGTTACAGCAGCTGTTGCGCCGTCAGGCGCTGGAACATGCCGCCAGCCCATTGGGAAGGGTGTCTTTCAGTGCCGGGATCGCGGTGGTCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3678286‑3678438‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccAGCGCCTCGATAGTGCCCCCCTCCCGCGCCAGGTCGACCACCGCGATCCCGGCACTGAAAGACACCCTTCCCAATGGGCTGGCGGCATGTTCCAGCGCCTGACGGCGCAACAGCTGCTGTAACTCCTGCACCAGCAGTTCCGCGCCA < NC_002947/3678469‑3678323 AGGAATTCACGCTGTTGCTGCCAGATACCGATGGCCGTGGCGCGGAACTGCTGGTGCAGGAGTTACAGCAGCTGTTGCGCCGTCAGGCGCTGGAACATGCCGCCAGCCCATTGGGAAGGGTGTCTTTCAGTGCCGGGATCGCGGTGGTC > 6:50295/1‑149AGGAATTCACGCTGTTGCTGCCAGATACCGATGGCCGTGGCGCGGAACTGCTGGTGCAGGAGTTACAGCAGCTGTTGCGCCGTCAGGCGCTGGAACATGCCGCCAGCCCATTGGGAAGGGTGTCTTTCAGTGCCGGGATCGAGGTGGTC > 2:266432/1‑149 ATTCAGGCTGTTGCTGCCAGATACCGATGGCCGTGGCGCGGAACTGCTGGTGCAGGAGTTACAGCAGCTGTTGCGCCGTCAGGCGCTGGAACATGCCGCCAGCCCATTGGGAAGGGTGTCTTTCAGTGCCGGGATCGCGGTGGTCGACC > 7:330810/1‑149 GCGCGGAACTGCTGGTGCAGGAGTTACAGCAGCTGTTGCGCCGTCAGGCGCTGGAACATGCCGCCAGCCCATTGGGAAGGGTGTCTTTCAGTGCCGGGATCGCGGTGGTCGACCAGCGCCTCGATAGTGCCCCCCTCCCGCGCCAGGT < 2:235632/148‑1 GAACTGCTGGTGCAGGAGTTACAGCAGCTGTTGCGCCGTCAGGCGCTGGAACATGCCGCCAGCCCATTGGGAAGGGTGTCTTTCAGTGCCGGGATCGCGGTGGTCGACCAGCGCCTCGATAGTGCCCCCCTCCCGCGCCAGGTCGACCA > 7:102702/1‑149 ACTGCTGGTGCAGGAGTTACAGCAGCTGTTGCGCCGTCAGGCGCTGGAACATGCCGCCAGCCCATTGGGAAGGGTGTCTTTCAGTGCCGGGATCGCGGTGGTCGACCAGCGCCTCGATAGTGCCCCCCTCCCGCGCCAGGTCGACCACC < 8:102702/149‑1 AGCAGCTGTTGCGCCGTCAGGCGCTGGAACATGCCGCCAGCCCATTGGGAAGGGTGTCTTTCAGTGCCGGGATCGCGGTGGTCGAC < 1:50967/86‑1 AGCAGCTGTTGCGCCGTCAGGCGCTGGAACATGCCGCCAGCCCATTGGGAAGGGTGTCTTTCAGTGCCGGGATCGCGGTGGTCGAC > 2:50967/1‑86 ACCAGCGCCTCGATAGTGCCCCCCTCCCGCGCCAGGTCGACCACCGCGATCCCGGCACTGAAAGACACCCTTCCCAATGGGCTGGCGGCATGTTCCAGCGCCTGACGGCGCAACAGCTGCTGTAACTCCTGCACCAGCAGTTCCGC > 7:810/1‑146 ACCAGCGCCTCGATAGTGCCCCCCTCCCGCGCCAGGTCGACCACCGCGATCCCGGCACTGAAAGACACCCTTCCCAATGGGCTGGCGGCATGTTCCAGCGCCTGACGGCGCAACAGCTGCTGTAACTCCTGCACCAGCAGTTCCGC < 8:810/146‑1 CCAGCGCCTCGATAGTGCCCCCCTCCCGCGCCAGGTCGACCACCGCGATCCCGGCACTGAAAGACACCCTTCC < 3:101610/73‑1 CCAGCGCCTCGATAGTGCCCCCCTCCCGCGCCAGGTCGACCACCGCGATCCCGGCACTGAAAGACACCCTTCC > 4:101610/1‑73 CCAGCGCCTCGATAGTGCCCCCCTACCTAGACAGGTCGACCACCGCGATCCCGTCACTGAAAGACACCCTTCCCAATGGGCTGGCGGCATGTTCCAGCGCCTGACGGCGCAACAGCTGCTGTAACTCCTGCACCAGCAGTTCCGCGCCA < 6:285373/149‑1 AGGAATTCACGCTGTTGCTGCCAGATACCGATGGCCGTGGCGCGGAACTGCTGGTGCAGGAGTTACAGCAGCTGTTGCGCCGTCAGGCGCTGGAACATGCCGCCAGCCCATTGGGAAGGGTGTCTTTCAGTGCCGGGATCGCGGTGGTCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3678286‑3678438‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccAGCGCCTCGATAGTGCCCCCCTCCCGCGCCAGGTCGACCACCGCGATCCCGGCACTGAAAGACACCCTTCCCAATGGGCTGGCGGCATGTTCCAGCGCCTGACGGCGCAACAGCTGCTGTAACTCCTGCACCAGCAGTTCCGCGCCA < NC_002947/3678469‑3678323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |