| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3910052 = | 59 (1.040) | 4 (0.070) | 3/248 | NT | 6.9% | coding (2001/2640 nt) | PP_3450 | TPR repeat‑containing protein |
| ? | NC_002947 | 3910097 = | 52 (0.960) | coding (2046/2640 nt) | PP_3450 | TPR repeat‑containing protein | |||||
GTAACTGGCCAAGGCTGAGGCCGCGATAGTGTGCTTCGTCGATCTGCCGCTGGTGGTAAAGCTCGGCATACAGGTTGAGGTTGGCCTGGCCGAGCGGCTTGTAGCGCAAGCCGACACCGGTTCCCATGCTCTGGGCATAGTCGGTGCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3910203‑3910052‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcttGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGATTTGCG > NC_002947/3910097‑3910243 GTAACTGGCCAAGGCTGAGGCCGCGATAGTGTGCTTCGTCGATCTGCCGCTGGTGGTAAAGCTCGGCATACAGGTTGAGGTTGGCCTGGCCGAGCGGCTTGTAGCGCAAGCCGACACCGGTTCCCAAGCTCTGGGCATAGTCGGTGCGG > 5:130780/1‑149 AAGCCGACACCGGTTCCCATGCTCTGGGCATAGTCGGTGCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGT > 7:346692/1‑149 AAGCCGACACCGGTTCCCATGCTCTGGGCATAGTCGGTGCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTT < 7:309023/95‑1 AAGCCGACACCGGTTCCCATGCTCTGGGCATAGTCGGTGCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTT > 8:309023/1‑95 ACACCGGTTCCCATGCTCTGGGCATAGTCGGTGCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGA < 8:346692/149‑1 aGGCTTGCGCTACAAGCCGCTCGGACAGGCCAACCTCAACCTGTATTCAGAGAGTTACCACCAGCGTCAGATCGACGAAGCACACTATCGCGGCATCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGATT < 8:313152/148‑1 GGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGATTT > 2:34733/1‑149 GGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGATTT > 3:30047/1‑149 GCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACA > 5:38056/1‑82 GCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACA < 6:38056/82‑1 TTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGATTTGCG > 4:142473/1‑149 TTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGATTTGCG > 4:147921/1‑149 GTAACTGGCCAAGGCTGAGGCCGCGATAGTGTGCTTCGTCGATCTGCCGCTGGTGGTAAAGCTCGGCATACAGGTTGAGGTTGGCCTGGCCGAGCGGCTTGTAGCGCAAGCCGACACCGGTTCCCATGCTCTGGGCATAGTCGGTGCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3910203‑3910052‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcttGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGATTTGCG > NC_002947/3910097‑3910243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |