New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3910052 =59 (1.040)4 (0.070) 3/248 NT 6.9% coding (2001/2640 nt) PP_3450 TPR repeat‑containing protein
?NC_002947 3910097 = 52 (0.960)coding (2046/2640 nt) PP_3450 TPR repeat‑containing protein

AGAACGTGCAACTGGCCATGTGGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGATTTGCGC  >  NC_002947/3909952‑3910244
                                                                                                                                                 |                                                                                                                                                    
aGAACGTGCAACTGGCCATGTGGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTgcgc                                                                                                                                                   >  4:165686/1‑149 (MQ=255)
aGAACGTGCAACTGGCCATGTGGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTATCGGCTTgcgc                                                                                                                                                   >  4:182327/1‑149 (MQ=255)
  aaCGTGCAACTGGCCATGTGGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTa                                                                                                                                                 <  4:108429/149‑1 (MQ=255)
  aaCGTGCAACTGGCCATGTGGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTa                                                                                                                                                 <  5:362096/149‑1 (MQ=255)
   aCGTGCAACTGGCCATGTGGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTAc                                                                                                                                                <  1:233553/149‑1 (MQ=255)
       gCAACTGGCCATGTGGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCAGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGc                                                                                                                                            >  8:174780/1‑149 (MQ=255)
        cAACTGGCCATGTGGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGcc                                                                                                                                           >  1:263724/1‑149 (MQ=255)
           cTGGCCATGTGGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCt                                                                                                                                        <  3:319568/149‑1 (MQ=255)
              gCCATGTGGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCg                                                                                                                                      <  3:165686/148‑1 (MQ=255)
              gCCATGTGGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTATCGGCTTGCGCTACAAGCCGCTCg                                                                                                                                      <  3:182327/148‑1 (MQ=255)
              gCCATGGGGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCg                                                                                                                                      <  7:73191/148‑1 (MQ=255)
                  tgtgGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCggccag                                                                                                                                <  4:64185/149‑1 (MQ=255)
                      ggACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCggccaggcca                                                                                                                            <  2:263724/149‑1 (MQ=255)
                        tcgaTGCCCTGGGCGTTGAGCCCAGCCGCATTGGCAGCACACTGTCAGTGTATGGCCGGGTACTGTTCGGGGGCCAAAGCCGCACCGACTATGCCCAGAGGATGGGAACCGGTGTCGGCTTGCGCTACAAGGCGCTCGGCCAGGCcaac                                                                                                                          <  4:197013/146‑1 (MQ=255)
                               ccTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCcaacctcaacc                                                                                                                   >  3:147809/1‑149 (MQ=255)
                               ccTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCCACAAGCCGCTCGGCCAGGCcaacctcaacc                                                                                                                   >  7:339576/1‑149 (MQ=255)
                                 tGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTg                                                                                                                 >  3:351104/1‑149 (MQ=255)
                                   ggCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGt                                                                                                                <  2:15954/148‑1 (MQ=255)
                                    gCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTAt                                                                                                              <  8:302266/149‑1 (MQ=255)
                                      gaggagCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGc                                                                                                            >  4:266345/1‑149 (MQ=255)
                                        ggagCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGcc                                                                                                           >  6:340075/1‑148 (MQ=255)
                                          agCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCCACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAg                                                                                                        <  8:339576/149‑1 (MQ=255)
                                               aGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCCAGGCCAACCTCAACCTGTATGCCGAGCttt                                                                                                    <  1:42504/149‑1 (MQ=255)
                                               aGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTa                                                                                                   <  2:198948/149‑1 (MQ=255)
                                                   gCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTaccac                                                                                               >  5:346208/1‑149 (MQ=255)
                                                    cAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTaccac                                                                                               >  2:184692/1‑148 (MQ=255)
                                                           agcaCCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCa                                                                                       <  1:349845/149‑1 (MQ=255)
                                                             caCCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCgg                                                                                         >  2:323608/1‑145 (MQ=255)
                                                             caCCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGa                                                                                     <  3:266345/149‑1 (MQ=255)
                                                                  tGTCAGTGTATGGCAGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTCTATGCCGAGCTTTACCACCAGCGGCAGATcgac                                                                                >  7:61905/1‑149 (MQ=255)
                                                                      aGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGaa                                                                             <  3:87765/148‑1 (MQ=255)
                                                                      aGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAg                                                                            >  3:139306/1‑149 (MQ=255)
                                                                          tATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGcaca                                                                        <  6:346208/149‑1 (MQ=255)
                                                                              gCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCGAACCTCAACCAGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTAt                                                                    >  7:196139/1‑149 (MQ=255)
                                                                              gCCGGGTACTGTTCAGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTAt                                                                    >  7:309389/1‑149 (MQ=255)
                                                                                         ttCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCttt                                                                                                    >  8:241087/1‑106 (MQ=255)
                                                                                         ttCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCttt                                                                                                    <  7:241087/106‑1 (MQ=255)
                                                                                         ttCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAg                                                         >  1:213667/1‑149 (MQ=255)
                                                                                              cggcCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTTCAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTg                                                    >  3:69790/1‑149 (MQ=255)
                                                                                              cggcCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTTCAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTg                                                    <  4:69790/149‑1 (MQ=255)
                                                                                                gcCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGc                                                  <  7:174780/149‑1 (MQ=255)
                                                                                                  cAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGc                                                  >  4:330713/1‑147 (MQ=255)
                                                                                                  cAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCa                                                <  3:330713/149‑1 (MQ=255)
                                                                                                   aaaGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAg                                               >  8:132247/1‑149 (MQ=255)
                                                                                                    aagccgacaccggttcccatgctctgggcatagtcggtgcggcttGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCttt                                                                                                    <  7:309023‑M2/50‑1 (MQ=255)
                                                                                                    aagccgacaccggttcccatgctctgggcatagtcggtgcggcttGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCttt                                                                                                    >  8:309023‑M2/46‑95 (MQ=255)
                                                                                                    aagccgacaccggttcccatgctctgggcatagtcggtgcggcttGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGt                                              >  7:346692‑M2/46‑149 (MQ=255)
                                                                                                       CCGCACCGACTATGCCCAGAGCTTGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTAc                                           >  5:130780‑M1/1‑149 (MQ=255)
                                                                                                          cACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGa                                        <  4:351104/149‑1 (MQ=255)
                                                                                                          cACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGa                                        <  1:184692/149‑1 (MQ=255)
                                                                                                          acaccggttcccatgctctgggcatagtcggtgcggcttGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGa                                        <  8:346692‑M2/110‑1 (MQ=255)
                                                                                                             cGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGaa                                                                             <  3:248888/109‑1 (MQ=255)
                                                                                                             cGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGaa                                                                             >  4:248888/1‑109 (MQ=255)
                                                                                                             cGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGcc                                     <  1:323608/149‑1 (MQ=255)
                                                                                                               aCTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCg                                   >  4:274286/1‑149 (MQ=255)
                                                                                                                   tGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGcc                                <  4:147809/148‑1 (MQ=255)
                                                                                                                         gagCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTcg                         <  2:213667/149‑1 (MQ=255)
                                                                                                                           gCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTcggc                       <  7:132247/149‑1 (MQ=255)
                                                                                                                             aTGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTcggcgg                     <  8:61905/149‑1 (MQ=255)
                                                                                                                                      ggTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTgggg            <  5:340075/149‑1 (MQ=255)
                                                                                                                                        tgtCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGc           >  4:305551/1‑148 (MQ=255)
                                                                                                                                         gtCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTcgg                        <  8:250655/134‑1 (MQ=255)
                                                                                                                                         gtCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTcgg                        >  7:250655/1‑134 (MQ=255)
                                                                                                                                          tCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCt                                                      <  5:185645/103‑1 (MQ=255)
                                                                                                                                          tCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCt                                                      >  6:185645/1‑103 (MQ=255)
                                                                                                                                           aggcttGCGCTACAAGCCGCTCGGACAGGCCAACCTCAACCTGTATTCAGAGAGTTACCACCAGCGTCAGATCGACGAAGCACACTATCGCGGCATCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGAtt       <  8:313152‑M2/143‑1 (MQ=255)
                                                                                                                                            ggcttGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGAttt      >  3:30047‑M2/6‑149 (MQ=255)
                                                                                                                                            ggcttGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGAttt      >  2:34733‑M2/6‑149 (MQ=255)
                                                                                                                                             gcttGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGcaca                                                                        >  5:38056‑M2/5‑82 (MQ=255)
                                                                                                                                             gcttGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGcaca                                                                        <  6:38056‑M2/78‑1 (MQ=255)
                                                                                                                                               ttGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGATTTgcg   >  4:147921‑M2/3‑149 (MQ=255)
                                                                                                                                               ttGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGATTTgcg   >  4:142473‑M2/3‑149 (MQ=255)
                                                                                                                                                 gcgcTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGATTTgcgc  <  4:139306/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
AGAACGTGCAACTGGCCATGTGGGACCATGCCCTGGGCGAGGAGCCCAGCCGCAATGGCAGCACCCTGTCAGTGTATGGCCGGGTACTGTTCGGCGGCCAAAGCCGCACCGACTATGCCCAGAGCATGGGAACCGGTGTCGGCTTGCGCTACAAGCCGCTCGGCCAGGCCAACCTCAACCTGTATGCCGAGCTTTACCACCAGCGGCAGATCGACGAAGCACACTATCGCGGCCTCAGCCTTGGCCAGTTACTGAGCCCGGCCAAGGTCGGCGGCAACTGGGGCGATTTGCGC  >  NC_002947/3909952‑3910244

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.