| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3950524 | 52 (0.920) | 3 (0.060) | 3/246 | NT | 5.6% | coding (513/1491 nt) | PP_3486 | cytochrome c |
| ? | NC_002947 | = 3950567 | 52 (0.970) | coding (470/1491 nt) | PP_3486 | cytochrome c | |||||
GGGCGAACACCCGCTTTTGCTCGAGCAACTGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3950370‑3950524‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcacgcTGCTGCCCGCGAGCGGTCCGCTGGCCGAAGCCGGGCAGGTGGTGCGTGCCGTGCTGGAAGACGGCGTGGGTCAACTCAACCAGCAAGGCGGCATTCACGGGCGGCGCCTGGAACTGGTCGTACTAGACCCAGGTTCCGACCCGGT < NC_002947/3950567‑3950423 GGGCGAACACCCGCTTTTGCTCGAGCAACTGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACG < 4:286405/149‑1GGGCGAACACCCGCTTTTGCTCGAGCAACTGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACG < 8:23017/149‑1 CCGCTTTTGCTCGAGCAACTGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACG < 3:210049/139‑1 CCGCTTTTGCTCGAGCAACTGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACG > 4:210049/1‑139 CCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCTGCTGCCCGCGAGCGGTCCGCTGGCCGAAGCCGGGCAGGTGGTGCGTG < 5:114228/149‑1 GTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCTGCTGCCCGCGAGCGGTCCGCTGGCCGAAGCCGGGCAGGTGGT < 5:296206/123‑1 GTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCTGCTGCCCGCGAGCGGTCCGCTGGCCGAAGCCGGGCAGGTGGT > 6:296206/1‑123 CACGCTGCTGCCCGCGAGCGGTCCGCTGGCCGAAGCCGGGCAGGTGGTGCGTGCCGTGCTGGAAGACGGCGTGGGTCAACTCAACCAGCAAGGCGGCATTCACGGGCGGCGCCTGGAACTGGTCGTACTAGACCCAGGTTCCGACCCGG < 2:135429/149‑1 CACGCTGCTGCCCGCGAGCGGTCCGCTGGCCGAAGCCGGGCAGGTGGTGCGTGCCGTGCTGGAAGACGGCGTGGGTCAACTCAACCAGCAAGGCGGCATTCACGGGCGGCGCCTGGAACTGGTCGTACTAGACCCAGGTTCCGACCCGG < 6:74035/149‑1 ACGCTGCTGCCCGCGAGCGGTCCGCTGGCCGAAGCCGGGCAGGTGGTGCGTGCCGTGCTGGAAGACGGCGTGGGTCAACTCAACCAGCAAGGCGGCATTCACGGGCGGCGCCTGGAACTGGTCGTACTAGACCCAGGTTCCGACCCGGT < 5:308708/149‑1 ACGCTGCTGCCCGCGAGCGGTCCGCTGGCCGAAGCCGGGCAGGTGGTGCGTGCCGTGCTGGAAGACGGCGTGGGTCAACTCAACCAGCAAGGCGGCATTCACGGGCGGCGCCTGGAACTGGTCGTACTAGACCCAGGTTCCGACCCGGT < 7:65432/149‑1 GCTGCTGCCCGCGAGCGGTCCGCTGGCCGAAGCCGGGCAGGTGGTGCGTGCCGTGCTGGAAGACGGCGTGGGTCAACTCAACCAGCAAGGCGGCATTCACGGGCGGCGCC > 3:243379/1‑110 GCTGCTGCCCGCGAGCGGTCCGCTGGCCGAAGCCGGGCAGGTGGTGCGTGCCGTGCTGGAAGACGGCGTGGGTCAACTCAACCAGCAAGGCGGCATTCACGGGCGGCGCC < 4:243379/110‑1 GGGCGAACACCCGCTTTTGCTCGAGCAACTGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3950370‑3950524‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcacgcTGCTGCCCGCGAGCGGTCCGCTGGCCGAAGCCGGGCAGGTGGTGCGTGCCGTGCTGGAAGACGGCGTGGGTCAACTCAACCAGCAAGGCGGCATTCACGGGCGGCGCCTGGAACTGGTCGTACTAGACCCAGGTTCCGACCCGGT < NC_002947/3950567‑3950423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |