| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4166027 | 48 (0.850) | 4 (0.070) | 4/250 | NT | 8.6% | coding (75/1335 nt) | PP_3666 | MHS family metabolite MFS transporter |
| ? | NC_002947 | = 4166061 | 39 (0.720) | coding (41/1335 nt) | PP_3666 | MHS family metabolite MFS transporter | |||||
ACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTGGTCTTGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4165876‑4166027‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccCCGCACACAACGCCGAACGCCAGGCGCTGCGCAAGGCCGCCCGGGCCAGCTTCATGGGCAACTTCGTCGAGTGGTTCGACTACGCCGCCTACGGCTATCTGGCCACCATCATCGCCGCCACCTTCTTCCCGCAAACTGACAAGACCA < NC_002947/4166061‑4165915 ACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTGGTCTTGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCG > 6:260988/1‑149 AACCGGTGGTCTTGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCCCGCACACAACGCCGAACGCCAGGCGCTGC > 4:341322/1‑149 GTCTTGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCCCGCACACAACGCCGAACGCCAGGCGCTGCGCAAGGC < 3:341322/148‑1 CGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCCCGCACACAACGCCGAACGCCAGGCGCTGCGCAAGGCCGCCCGG < 5:98802/88‑1 CGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCCCGCACACAACGCCGAACGCCAGGCGCTGCGCAAGGCCGCCCGG > 6:98802/1‑88 GCCCCGCACACAACGCCGAACGCCAGGCGCTGCGCAAGGCCGCCCGGGCCAGCTTCATGGGCAACTTCGTCGAGAGGTTCGCATACGCCGCCTACGGCTATCTGGCCACAATCATCGCCGCCCCCTTCATCCCGCAAACTCCCAAGAC > 7:144692/1‑148 CCCCGCACACAACGCCGAACGCCAGGCGCTGCGCAAGGCCGCCCGGGCCAGCTTCATGGGCAACTTCGTCGAGTGGTTCGACTACGCCGCCTACGGCTATCTGGCCACCATCATCGCCGCCACCTTCTTCCCGCAAACTGACAAGACCA > 3:138500/1‑149 ACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTGGTCTTGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4165876‑4166027‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccCCGCACACAACGCCGAACGCCAGGCGCTGCGCAAGGCCGCCCGGGCCAGCTTCATGGGCAACTTCGTCGAGTGGTTCGACTACGCCGCCTACGGCTATCTGGCCACCATCATCGCCGCCACCTTCTTCCCGCAAACTGACAAGACCA < NC_002947/4166061‑4165915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |