New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4166027	48 (0.850)	4 (0.070)	4/250	NT	8.6%	coding (75/1335 nt)	PP_3666	MHS family metabolite MFS transporter
	?	NC_002947	= 4166061	39 (0.720)					coding (41/1335 nt)	PP_3666	MHS family metabolite MFS transporter

TGGTCTTGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCTGGTGGTCATACGGGGATCTTGTTGTTGTCTGGGCCGGCCTATTCGCGGGT  >  NC_002947/4165915‑4166191                                                                                                                                                   |                                                                                                                                   tggtCTTGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGgg                                                                                                                                  >  3:138500‑M2/1‑147 (MQ=255)   gtCTTGGGAGTTTGCGGGATGAAGGGGGCGGCGATGATTGTGGCCAGATAGCCGTAGGCGGCGTATGCGAACCTCTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGggc                                                                                                                                 >  7:144692‑M2/1‑145 (MQ=255)      ttGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGc                                                                                                                             >  1:86590/1‑149 (MQ=255)      ttGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGc                                                                                                                             >  5:248286/1‑149 (MQ=255)            gTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGc                                                                                                                       >  8:196209/1‑149 (MQ=255)             tttGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCg                                                                                                                      >  1:159143/1‑149 (MQ=255)             tttGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCg                                                                                                                      >  6:101516/1‑149 (MQ=255)                gCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGa                                                                                                                    <  5:260988/148‑1 (MQ=255)                  gtgaagaaGGTGGCGGCGATGATGGTCGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATgg                                                                                                                 <  1:154742/147‑1 (MQ=255)                  gggAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATgg                                                                                                                 >  8:292368/1‑149 (MQ=255)                     aagaagGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGGGATGGCGGATggggg                                                                                                              >  7:240041/1‑147 (MQ=255)                        aagGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAg                                                                                                           <  7:292368/149‑1 (MQ=255)                         agGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAgg                                                                                                          <  5:101516/149‑1 (MQ=255)                            tGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAggggg                                                                                                       <  4:318279/149‑3 (MQ=255)                            tGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGgatg                                                                                                       <  7:196209/149‑1 (MQ=255)                                      gatgGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTATGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACa                                                                                             >  3:170872/1‑149 (MQ=255)                                        tggtggCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACAt                                                                                            >  1:287672/1‑148 (MQ=255)                                          gtggCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGAc                                                                                         >  8:67340/1‑149 (MQ=255)                                             gCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACggg                                                                                      <  8:186933/149‑1 (MQ=255)                                             gCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTATGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACgg                                                                                       <  4:170872/148‑1 (MQ=255)                                                 gATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTAcc                                                                                  <  7:67340/149‑1 (MQ=255)                                                      ccGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTg                                                                             <  2:159143/149‑1 (MQ=255)                                                             cggcgTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCttt                                                                      <  2:86590/149‑1 (MQ=255)                                                              ggcgTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCtttt                                                                     <  1:190320/149‑1 (MQ=255)                                                                 gTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAAt                                                                  >  2:68288/1‑149 (MQ=255)                                                                 gTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAAt                                                                  <  6:248286/149‑1 (MQ=255)                                                                          ccACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAg                                                             >  3:169607/1‑145 (MQ=255)                                                                          ccACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAg                                                             <  4:169607/145‑1 (MQ=255)                                                                                 acgaAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAg                                                             <  5:243567/138‑1 (MQ=255)                                                                                 acgaAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAg                                                             >  6:243567/1‑138 (MQ=255)                                                                                    aaGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCtggtgg                                               <  3:115466/149‑1 (MQ=255)                                                                                       ttGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCtggtgg                                               >  7:172180/1‑146 (MQ=255)                                                                                       ttGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCtggtgg                                               <  8:172180/146‑1 (MQ=255)                                                                                            cATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCTGGTGGTCATACgg                                       >  5:218768/1‑149 (MQ=255)                                                                                               gAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCTGGTGGTCATACGGGGa                                    >  4:68073/1‑149 (MQ=255)                                                                                               gAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGCGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCTGGTGGTCATACGGGGa                                    >  2:132882/1‑149 (MQ=255)                                                                                                 aGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCTGGTGGTCATACGGGGATc                                  <  2:287672/149‑1 (MQ=255)                                                                                                    tGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCTGGTGGTCATACGGGGATCttg                               >  2:213741/1‑149 (MQ=255)                                                                                                        ccGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGggccgcccgggccagcttcatgggcaacttcgtcgagtggttcg                                                                                        >  6:98802‑M2/1‑44 (MQ=255)                                                                                                        ccGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGggccgcccgggccagcttcatgggcaacttcgtcgagtggttcg                                                                                        <  5:98802‑M2/88‑45 (MQ=255)                                                                                                         ggggCGGCCTTGCGCTGCGCGTGGGGTTCGGCGTTTTGTGGGGGGCCGGCGATGGCGGATGGGTCTTGGGTGGTGCTGGACATGAGGGGTACCCTCTGGTTCTTTTTATTGGAGGCAGGGTCTGGTGGTCATACGGGGATCttgttgtt                          <  1:68288/148‑1 (MQ=255)                                                                                                         cGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCTGGTGGTCATACGGGGATCttgttgtt                          <  6:218768/149‑1 (MQ=255)                                                                                                               gcCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGggccgcccgggccagcttcatgggcaacttcgtcgagtggttcgactacgccgcctacggctatctggccaccatcatcgccgccaccttcttcccgcaaactgacaagac                     <  3:341322‑M2/148‑112 (MQ=255)                                                                                                                  ttGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCTGGTGGTCATACGGGGATCttgttg                            <  7:257991/138‑1 (MQ=255)                                                                                                                  ttGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCTGGTGGTCATACGGGGATCttgttg                            >  8:257991/1‑138 (MQ=255)                                                                                                                      gcAGCGCCTGGCGTTCGGCGTTGTGTGCGGggccgcccgggccagcttcatgggcaacttcgtcgagtggttcgactacgccgcctacggctatctggccaccatcatcgccgccaccttcttcccgcaaactgacaagaccaccggtt             >  4:341322‑M2/1‑30 (MQ=255)                                                                                                                                 cGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCTGGTGGTCATACGGGGATCTTGTTGTTGTCTGGGCCGGCCTATTCGCGGGt  <  1:213741/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                   TGGTCTTGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCGTAGTCGAACCACTCGACGAAGTTGCCCATGAAGCTGGCCCGGGCGGCCTTGCGCAGCGCCTGGCGTTCGGCGTTGTGTGCGGGGCCGGCGATGGCGGATGGGTCTAGGGTGGTGCTGGACATGACGGGTACCCTCTGGTTCTTTTAATTGGAGGCAGGGTCTGGTGGTCATACGGGGATCTTGTTGTTGTCTGGGCCGGCCTATTCGCGGGT  >  NC_002947/4165915‑4166191

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.