| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4422374 = | 52 (0.920) | 3 (0.060) | 3/244 | NT | 6.3% | coding (454/678 nt) | PP_3913 | hypothetical protein |
| ? | NC_002947 | 4422426 = | 40 (0.750) | coding (506/678 nt) | PP_3913 | hypothetical protein | |||||
ACCATCGATCCGCAGGAACTCGCGCACTGACGACTTGAGCTCAGCCA‑GTTGGGCAAGCAACGCCTTGCGCGTTTCCTCGGCAGCTTCCATGTAGTCGGTCTTGTGCTGGCGAAGCGCAGCCAATTCTTTGCGCAGTTCGTGCTCACGCTCGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4422529‑4422374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagcACAAGACCGACTACATGGAAGCTGCCGAGGAAACGCGCAAGGCGTTGCTTGCCCAACTGGCTGAGCTCAAGTCGTCAGTGCGCGAGTTCCTGCGGATCGATGGTATCTCGGTCGATGGGTCGGCAGCACGCAACAAGGCGCTGACGAT > NC_002947/4422426‑4422573 ACCATCGATCCGCAGGAACTCGCGCACTGACGACTTGAGCTCAGCCA‑GTTGGGCAAGCAACGCCTTGCGCGTTTCCTCGGCAGCTTCCATGTAGTCGGTCTTGTGCTGGCGAAGCGCAGCCAATTCTTTGCGCAGTTCGTGCTCACGCT > 6:50677/1‑149ACCATCGATCCGCAGGAACTCGCGCACTGACGACTTGAGCTCAGCCA‑GTTGGGCAAGCAACGCCTTGCGCGTTTCCTCGGCAGCTTCCATGTAGTCGGTCTTGTGCTGGCGAAGCGCAGCCAATTCTTTGCGCAGTTCGTGCTCACGCT > 8:5621/1‑149 ATCGATCCGCAGGAACTCGCGCACTGACGACTTGAGCTCAGCCAGGTTGGGCAAGCAACGCCTTGCGCGTTTCCTCGGCAGCTTCCATGTAGTCGGTCTTGTGCTGGCGAAGCGCAGCCAATTCTTTGCGCAGTTCGTGCTCACGCTCG > 1:74789/1‑149 CAGGAACTCGCGCACTGACGACTTGAGCTCAGCCA‑GTTGGGCAAGCAACGCCTTGCGCGTTTCCTCGGCAGCTTCCATGTAGTCGGTCTTGTGCTGGCGAAGCGCAGCCAATTCTTTGCGCAGTTCGTGCTCACGCTC < 7:266326/138‑1 CAGGAACTCGCGCACTGACGACTTGAGCTCAGCCA‑GTTGGGCAAGCAACGCCTTGCGCGTTTCCTCGGCAGCTTCCATGTAGTCGGTCTTGTGCTGGCGAAGCGCAGCCAATTCTTTGCGCAGTTCGTGCTCACGCTC > 8:266326/1‑138 TCTTGTGCTGGCGAAGCGCAGCCAATTCTTTGCGCAGTTCGTGCTCACGCTCGCCAGCACAAGACCGACTACATGGAAGCTGCCGAGGAAACGCGCAAGGCGTTGCTTGCCCAACTGGCTGAGCTCAAGTCGTCAGTGCGC < 1:291030/141‑1 TCTTGTGCTGGCGAAGCGCAGCCAATTCTTTGCGCAGTTCGTGCTCACGCTCGCCAGCACAAGACCGACTACATGGAAGCTGCCGAGGAAACGCGCAAGGCGTTGCTTGCCCAACTGGCTGAGCTCAAGTCGTCAGTGCGC > 2:291030/1‑141 CTTGTGCTGGCGAAGCGCAGCCAATTCTTTGCGCAGTTCGTGCTCACGCTCGCCAGCACAAGACCGACTACATGGAAGCTGCCGAGGAAACGCGCAAGGCGTTGCTTGCCCAACTGGCTGAGCTCAAGTCGTCAGTGCGCGAGTTCCTG > 6:176405/1‑149 CAGCACAAGACCGACTACATGGAAGCTGCCGAGGAAACGCGCAAGGCGTTGCTTGCCCAACTGGCTGAGCTCAAGTCGTCAGTGCGCGAGTTCCTGCGGATCGATGGTATCTCGGTCGATGGGTCGGCAGCACGCAACAAGGCGCT > 5:35061/1‑146 CAGCACAAGACCGACTACATGGAAGCTGCCGAGGAAACGCGCAAGGCGTTGCTTGCCCAACTGGCTGAGCTCAAGTCGTCAGTGCGCGAGTTCCTGCGGATCGATGGTATCTCGGTCGATGGGTCGGCAGCACGCAACAAGGCGCT < 6:35061/146‑1 AGCACAAGACCGACTACATGGAAGCTGCCGAGGAAACGCGCAAGGCGTTGCTTGCCCAACTGGCTGAGCTCAAGTCGTCAGTGCGCGAGTTCCTGCGGATCGATGGTATCTCGGTCGATGGGTCGGCAGCACGCAACAAGGCGCTGACG < 6:229446/149‑1 CACAAGACCGACTACATGGAAGCTGCCGAGGAAACGCGCAAGGCGTTGCTTGCCCAACTGGCTGAGCTCAAGTCGTCAGTGCGCGAGTTCCTGCGGATCGATGGTATCTCGGTCGATGGGTCGGCAGCACGCAACAAGGCGCTGACGAT > 1:274132/1‑149 ACCATCGATCCGCAGGAACTCGCGCACTGACGACTTGAGCTCAGCCA‑GTTGGGCAAGCAACGCCTTGCGCGTTTCCTCGGCAGCTTCCATGTAGTCGGTCTTGTGCTGGCGAAGCGCAGCCAATTCTTTGCGCAGTTCGTGCTCACGCTCGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4422529‑4422374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagcACAAGACCGACTACATGGAAGCTGCCGAGGAAACGCGCAAGGCGTTGCTTGCCCAACTGGCTGAGCTCAAGTCGTCAGTGCGCGAGTTCCTGCGGATCGATGGTATCTCGGTCGATGGGTCGGCAGCACGCAACAAGGCGCTGACGAT > NC_002947/4422426‑4422573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |