| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4592868 = | 46 (0.810) | 3 (0.060) | 3/250 | NT | 6.5% | coding (1127/1953 nt) | mccA | methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha |
| ? | NC_002947 | 4592908 = | 42 (0.770) | coding (1167/1953 nt) | mccA | methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha | |||||
AAGGCAATGTTGGTTTTCAGCCCGCCAATGGCGAACTCATCGAGCATGGCCAGCAAGCGCAAACGCGCCTGCTCGCGGTCTTCGCCCCAGGCGATCAGCTTGCCCAGCATCGGGTCGTAGAACGGCGACACCACATCGCCTTCGCTGACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4593018‑4592868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacccGATGCTGGGCAAGCTGATCGCCTGGGGCGAAGACCGCGAGCAGGCGCGTTTGCGCTTGCTGGCCATGCTCGATGAGTTCGCCATTGGCGGGCTGAAAACCAACATTGCCTTCCTGCGGCGCATTCTCGCCCACCCGGCATTTGCTG > NC_002947/4592908‑4593053 AAGGCAATGTTGGTTTTCAGCCCGCCAATGGCGAACTCATCGAGCATGGCCAGCAAGCGCAAACGCGCCTGCTCGCGGTCTTCGCCCCAGGCGATCAGCTTGCCCAGCATCGGGTCGTAGAACGGCGACACCACATCGCCTTCGCTGAC < 6:237364/149‑1 CATCGAGCATGGCCAGCAAGCGCAAACGCGCCTGCTCGCGGTCTTCGCCCCAGGCGATCAGCTTGCCCAGCATCGGGTCGTAGAACGGCGACACCACATCGCCTTCGCTGACC > 3:235583/1‑113 CATCGAGCATGGCCAGCAAGCGCAAACGCGCCTGCTCGCGGTCTTCGCCCCAGGCGATCAGCTTGCCCAGCATCGGGTCGTAGAACGGCGACACCACATCGCCTTCGCTGACC < 4:235583/113‑1 CATCGGGTCGTAGAACGGCGACACCACATCGCCTTCGCTGACCCGATGCTGGGCAAGCTGATCGCCTGGGGCGAAGACCGCGAGCAGGCGCGTTTGCGCTTGCTGGCCATGCTCGATGA < 3:356674/119‑1 CATCGGGTCGTAGAACGGCGACACCACATCGCCTTCGCTGACCCGATGCTGGGCAAGCTGATCGCCTGGGGCGAAGACCGCGAGCAGGCGCGTTTGCGCTTGCTGGCCATGCTCGATGA > 4:356674/1‑119 TCGGGTCGTAGAACGGCGACACCACATCGCCTTCGCTGACCCGATGCTGGGCAAGCTGATCGCCTGGGGCGAAGACCGCGAGCAGGCGCGTTTGCGCTTGCTGGCCATGCTCGATGAGTTCGCCATTGGCGGGCTGAAAACCAACATTG > 2:66957/1‑149 GACCCGATGCTGGGCAAGCTGATCGCCTGGGGCGAAGACCGCGAGCAGGCGCGTTTGCGCTTGCTGGCCATGCTCGATGAGTTCGCCATTGGCGGGCTGAAAACCAACATTGCCTTCCTGCGGCGCATTCTCGCCCACCCGGCATTTGC > 1:357439/1‑149 GACCCGATGCTGGGCAAGCTGATCGCCTGGGGCGAAGACCGCGAGCAGGCGCGTTTGCGCTTGCTGGCCATGCTCGATGAGTTCGCCATTGGCGGGCTGAAAACCAACATTGCCTTCCTGCGGCGCATTCTCGCCCACCCGGCATTTGC > 4:19414/1‑149 GACCCGATGCTGGGCAAGCTGATCGCCTGGGGCGAAGACCGCGAGCAGGCGCGTTTGCGCTTGCTGGCCATGCTCGATGAGTTCGCCATTGGCGGGCTGAAAACCAACATTGCCTTCCTGCGGCGCATTCTCGCCCACCCGGCATTTGC > 5:182895/1‑149 ACCCGATGCTGGGCAAGCTGATCGCCTGGGGCGAAGACCGCGAGCAGGCGCGTTT < 7:212937/55‑1 ACCCGATGCTGGGCAAGCTGATCGCCTGGGGCGAAGACCGCGAGCAGGCGCGTTT > 8:212937/1‑55 CCCGATGCTGGGCAAGCTGATCGCCTGGGGCGAAGACCGCGAGCAGGCGCGTTTGCGCTTGCTGGCCATGCTCGATGAGTTCGCCATTGGCGGGCTGAAAACCAACATTGCCTTCCTGCGGCGCATTCTCGCCCACCCGGCATTTGCTG > 1:152108/1‑149 AAGGCAATGTTGGTTTTCAGCCCGCCAATGGCGAACTCATCGAGCATGGCCAGCAAGCGCAAACGCGCCTGCTCGCGGTCTTCGCCCCAGGCGATCAGCTTGCCCAGCATCGGGTCGTAGAACGGCGACACCACATCGCCTTCGCTGACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4593018‑4592868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacccGATGCTGGGCAAGCTGATCGCCTGGGGCGAAGACCGCGAGCAGGCGCGTTTGCGCTTGCTGGCCATGCTCGATGAGTTCGCCATTGGCGGGCTGAAAACCAACATTGCCTTCCTGCGGCGCATTCTCGCCCACCCGGCATTTGCTG > NC_002947/4592908‑4593053 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |