New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4870535 | 31 (0.550) | 4 (0.070) | 4/248 | NT | 10.9% | coding (2285/2400 nt) | xdhB | xanthine dehydrogenase subunit XdhB |
? | NC_002947 | = 4870575 | 36 (0.670) | coding (2325/2400 nt) | xdhB | xanthine dehydrogenase subunit XdhB |
ACTTGCGGGTGAAGCTGGTGGAGAACCGCAAGAACCCGGAAGACACCGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4870382‑4870535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagccCCACAGCACCCGCTCCGGCGTTGCCGGCGCATCCACCTGCGGCTGCACGCGGTAATCAGCCAGGCTGGCCACGGCATCCTTGATTGCACACCAGGCAGCAATGCCGAGCATGAACGGGGGCTCGCCCACGGCCTTGGAGTGGAACACG < NC_002947/4870575‑4870428 ACTTGCGGGTGAAGCTGGTGGAGAACCGCAAGAACCCGGAAGACACCGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTG > 3:75248/1‑149 GCGGGTGAAGCTGGTGGAGAACCGCAAGAACCCGGAAGACACCGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGC > 8:164641/1‑149 GGTGAATCTTGTGGAGAACCGCAAGAACCCGGAAGACACCGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAG < 8:311573/145‑1 GGTGAAGCTGGTGGAGAACCGCAAGAACCCGGAAGACACCGTGTTCCACTCCAAGGCCGTGGGCGAGCACCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAG > 7:311573/1‑145 CCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCCCACAGCACCCGCTCCGGCGTTGCCGGCGCATCCACCTGCGGCTGC < 4:283466/148‑1 ACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTTTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCCCACAGCACCCGCTCCGGCGTTGCCGGCGCATCCACCTGCGGCTGCACG < 6:220169/149‑1 TCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCCCACAGCACCCGCTCCGGCGTTGCCGGCGCATCCACCTGCGGCTGCA > 1:180039/1‑145 TCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCCCACAGCACCCGCTCCGGCGTTGCCGGCGCATCCACCTGCGGCTGCA < 2:180039/145‑1 GCAGCCCCACAGCACCCGCTCCGGCGTTGCCGGCGCATCCACCTGCGGCTGCACGCGGTAATCAGCCAGGCTGGCCACGGCATCCTTGATTGCACACCAGGCAGCAATGCCGAGCATGAACGGGGGCTCGCCCACGGCCTTGGAGTGGA < 6:346847/149‑1 GCAGCCCCACAGCACCCGCTCCGGCGTTGCCGGCGCATCCACCTGCGGCTGCACGCGGTAATCAGCCAGGCTGGCCACGGCATCCTTGATTGCACACCAGGCAGCAATGCCGAGCATGAACGGGGGCTCGCCCACGGCCTTGGAGTGG > 3:215737/1‑148 CCCACAGCACCCGCTCCGGCGTTGCCGGCGCATCCACCTGCGGCTGCACGCGGTAATCAGCCAGGCTGGCCACGGCATCCTTGATTGCACACCAGGCAGCAATGCCGAGCATGAACGGGGGCTCGCCCACGGCCTTGGAGTGGAACACG < 2:344204/149‑1 CCCACAGCACCCGCTCCGGCGTTGCCGGCGCATCCACCTGCGGCTGCACGCGGTAATCAGCCAGGCTGGCCACGGCATCCTTGATTGCACACCAGGCAGCAATGCCGAGCATGAACGGGGGCTCGCCCACGGCCTTGGAGTGGAACACG > 7:153367/1‑149 ACTTGCGGGTGAAGCTGGTGGAGAACCGCAAGAACCCGGAAGACACCGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4870382‑4870535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagccCCACAGCACCCGCTCCGGCGTTGCCGGCGCATCCACCTGCGGCTGCACGCGGTAATCAGCCAGGCTGGCCACGGCATCCTTGATTGCACACCAGGCAGCAATGCCGAGCATGAACGGGGGCTCGCCCACGGCCTTGGAGTGGAACACG < NC_002947/4870575‑4870428 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |