New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4870535	31 (0.550)	4 (0.070)	4/248	NT	10.9%	coding (2285/2400 nt)	xdhB	xanthine dehydrogenase subunit XdhB
	?	NC_002947	= 4870575	36 (0.670)					coding (2325/2400 nt)	xdhB	xanthine dehydrogenase subunit XdhB

GGGTGAAGCTGGTGGAGAACCGCAAGAACCCGGAAGACACCGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCC  >  NC_002947/4870388‑4870683                                                                                                                                                    |                                                                                                                                                     gggTGAAGCTGGTGGAGAACCGCAAGAACCCGGAAGACACCGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCg                                                                                                                                                     <  2:293672/149‑1 (MQ=255)  gggcaaGCTGGGGGCGAACCGCAAGAACCCGTAATACACGGTTTTCCACTCCAAGGCGGTGGGCTTGCCCCCGTGCTTGCTCGGCTTTGCTGCCTGGTGTGGAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGc                                                                                                                                                    <  1:79796/145‑1 (MQ=255)   gTGAAGCTGGTGGAGAACCGCAAGAACCCGGAAGACACCGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCg                                                                                                                                                     >  2:253112/1‑147 (MQ=255)     gAAGCTGGTGGAGAACCGCAAGAACCCGGAAGACACCGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAgg                                                                                                                                                 >  8:47418/1‑149 (MQ=255)                     cGCAAGAACCCGGAAGACACCGTGTTCCACTCCAAGTCCGTGGGCGAGCCCCCGTTAATGCTCGGCATTGATGCCTGGTGTGCAATCAAGGATGCAGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAAc                                                                                                                                 >  3:339586/1‑149 (MQ=255)                       cAAGAACCCGGAAGACACCGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGc                                                                                                                               <  7:47418/149‑1 (MQ=255)                               cGGAAGACACCGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCgg                                                                                                                       <  5:282632/149‑1 (MQ=255)                                        ccGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTgg                                                                                                              <  4:75248/149‑1 (MQ=255)                                        ccGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTgg                                                                                                              <  3:169094/149‑1 (MQ=255)                                        ccGGGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTgg                                                                                                              <  6:208256/149‑1 (MQ=255)                                         cGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGg                                                                                                             >  7:153367‑M2/1‑148 (MQ=255)                                         cGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGg                                                                                                             <  2:344204‑M2/149‑2 (MQ=255)                                              tCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGggctgc                                                                                                        <  6:346847‑M2/149‑7 (MQ=255)                                               ccACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCccacagcacccgctccggcgttgccggcgcatccacctgcggctgc                                                                                                        <  4:283466‑M1/148‑47 (MQ=255)                                               ccACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGggctgc                                                                                                        >  3:215737‑M2/1‑142 (MQ=255)                                                 aCTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTTTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCccacagcacccgctccggcgttgccggcgcatccacctgcggctgcacg                                                                                                     <  6:220169‑M1/149‑50 (MQ=255)                                                 aCTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAg                                                                                                     <  1:253112/149‑1 (MQ=255)                                                 aCTCCAAGGCCGGGGGGGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCTGCCCTTTTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAg                                                                                                     <  1:111346/149‑1 (MQ=255)                                                   tCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCccacagcacccgctccggcgttgccggcgcatccacctgcggctgca                                                                                                       >  1:180039‑M1/1‑98 (MQ=255)                                                   tCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCccacagcacccgctccggcgttgccggcgcatccacctgcggctgca                                                                                                       <  2:180039‑M1/145‑48 (MQ=255)                                                     cAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAg                                                                                                     >  6:147465/1‑145 (MQ=255)                                                      aaGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGAt                                                                                                <  7:164641/149‑1 (MQ=255)                                                        ggCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCGATCACGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATgc                                                                                              <  5:248153/149‑1 (MQ=255)                                                          ccGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATgcgc                                                                                            <  5:147465/149‑1 (MQ=255)                                                              gggCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAgg                                                                                        >  1:353995/1‑149 (MQ=255)                                                               ggCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGc                                                                                       <  6:216678/149‑1 (MQ=255)                                                                     cccccGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGc                                                                                 >  4:175558/1‑149 (MQ=255)                                                                              aTGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAAcaca                                                                        <  4:1514/149‑1 (MQ=255)                                                                                  tCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTcg                                                                    >  1:202481/1‑149 (MQ=255)                                                                                       aTTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTcgcgcg                                                                >  5:216583/1‑148 (MQ=255)                                                                                              ccTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGaa                                                        >  5:9689/1‑149 (MQ=255)                                                                                               cTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAAc                                                       <  2:202481/149‑1 (MQ=255)                                                                                                  gtgtGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACt                                                      <  1:344204/147‑1 (MQ=255)                                                                                                     tgCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGaaa                                                 >  7:215416/1‑149 (MQ=255)                                                                                                          tCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCaa                                                                                          <  8:265055/103‑1 (MQ=255)                                                                                                          tCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCaa                                                                                          >  7:265055/1‑103 (MQ=255)                                                                                                          tCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATc                                            <  5:346847/149‑1 (MQ=255)                                                                                                                     gTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGAc                                  >  3:214285/1‑148 (MQ=255)                                                                                                                       ggCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAAc                               >  2:248139/1‑149 (MQ=255)                                                                                                                         ccAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACg                              >  7:255585/1‑148 (MQ=255)                                                                                                                                 gCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGccc                      <  3:175558/148‑1 (MQ=255)                                                                                                                                         ccGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTcgcgc                                                                 <  3:288048/97‑1 (MQ=255)                                                                                                                                         ccGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTcgcgc                                                                 >  4:288048/1‑97 (MQ=255)                                                                                                                                            cgTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGggctgcacgcggtaatcagccaggctggccacggcatccttgattgcaaaccaggcagcaatgccgagcatgaacgggggctcgcccacggccttggagt          <  6:220169‑M2/149‑101 (MQ=255)                                                                                                                                              tGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGggctgcacgcggtaatcagccaggctggccacggcatccttgattgcacaccaggcagcaatgccgagcatgaacgggggctcgcccacggccttgga            <  2:180039‑M2/145‑99 (MQ=255)                                                                                                                                              tGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGggctgcacgcggtaatcagccaggctggccacggcatccttgattgcacaccaggcagcaatgccgagcatgaacgggggctcgcccacggccttgga            >  1:180039‑M2/1‑47 (MQ=255)                                                                                                                                               gCAGCCccacagcacccgctccggcgttgccggcgcatccacctgcggctgcacgcggtaatcagccaggctggccacggcatccttgattgcacaccaggcagcaatgccgagcatgaacgggggctcgcccacggccttggagtgga       <  6:346847‑M1/149‑144 (MQ=255)                                                                                                                                               gCAGCCccacagcacccgctccggcgttgccggcgcatccacctgcggctgcacgcggtaatcagccaggctggccacggcatccttgattgcacaccaggcagcaatgccgagcatgaacgggggctcgcccacggccttggagtgg        >  3:215737‑M1/1‑6 (MQ=255)                                                                                                                                               gCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGggctgcacgcggtaatcagccaggctggccacggcatccttgattgcacaccaggcagcaatgccgagcatgaacgggggctcgcccacggccttggagtgg        <  4:283466‑M2/148‑103 (MQ=255)                                                                                                                                                 aGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTa     >  3:111110/1‑149 (MQ=255)                                                                                                                                                  gCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTAc    <  8:255585/149‑1 (MQ=255)                                                                                                                                                    cccacagcacccgctccggcgttgccggcgcatccacctgcggctgcacgcggtaatcagccaggctggccacggcatccttgattgcacaccaggcagcaatgccgagcatgaacgggggctcgcccacggccttggagtggaacacg  <  2:344204‑M1/149‑149 (MQ=255)                                                                                                                                                    cccacagcacccgctccggcgttgccggcgcatccacctgcggctgcacgcggtaatcagccaggctggccacggcatccttgattgcacaccaggcagcaatgccgagcatgaacgggggctcgcccacggccttggagtggaacacg  >  7:153367‑M1/1‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GGGTGAAGCTGGTGGAGAACCGCAAGAACCCGGAAGACACCGTGTTCCACTCCAAGGCCGTGGGCGAGCCCCCGTTCATGCTCGGCATTGCTGCCTGGTGTGCAATCAAGGATGCCGTGGCCAGCCTGGCTGATTACCGCGTGCAGCCGCAGGTGGATGCGCCGGCAACGCCGGAGCGGGTGCTGTGGGGCTGCGAGCAGATGCGCAAGGCAGTGGCTGAAACACAGTCGCGCGAACGGGAACTGGAAACCATCACCCCCTGACAACGCAAGGCCCTTGTAGGAGCGGGTTTACCC  >  NC_002947/4870388‑4870683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.