New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5000321 = | 49 (0.860) | 4 (0.070) | 4/246 | NT | 7.7% | coding (1174/1383 nt) | PP_4407 | gamma‑aminobutyrate transporter |
? | NC_002947 | 5000404 = | 50 (0.930) | coding (1257/1383 nt) | PP_4407 | gamma‑aminobutyrate transporter |
GAAGTACCCCGCCACCACCAGCAGTACCGTCAGCACCGTGAACCAGAATTGGAAACGCGATGCCGGGTCGAACGCCTGGGTGCCGATGACTGCCAGCAAGGCGAACAGCGCAATGATATTGGTGTAGGGGAACAGCCAGGCACGGAAGGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5000473‑5000321 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgttCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGGTACTTCCTGATGCGCCAGCGGCTGGCGTCAAGCGCGGTGTTAGCCCACGAACGTGATGCATGACAGCGCTGGCCACGCGC > NC_002947/5000404‑5000547 GAAGTACCCCGCCACCACCACCAGTACCGTCACCACCCTGAACCACAATTGGAAACGCGATGCCGCGTCGAACGCCTGGGTGCCGATGACTGCCAGCAAGGCGAACAGCGCAATGATATTGGTGTAAGGGAACAGCCAGGCACGCAAGG > 6:151352/1‑149 CGGGTCGAACGCCTGGGTGCCGATGACTGCCAGCAAGGCGAACAGCGCAATGATATTGGTGTAGGGGAACAGCCAGGCACGGAAGGCGTTCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGG > 7:240680/1‑149 GAACGCCTGGGTGCCGATGACTGCCAGCAAGGCGAACAGCGCAATGATATTGGTGTAGGGGAACAGCCAGGCACGGAAGGCGTTCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGG > 5:113714/1‑148 CCAGCAAGGCGAACAGCGCAATGATATTGGTGTAGGGGAACAGCCAGGCACGGAAGGCGTTCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGGTACTTCCTGATGCGCCAGCGGCT < 8:240680/148‑1 AGCAAGGCGAACAGCGCAATGATATTGGTGTAGGGGAACAGCCAGGCACGGAAGGCGTTCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGGTACTTCCTGATGCGCCAGCGGCTGGC < 6:113714/149‑1 GCGTTCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGGTACTTCCTGATGCGCCAGCGGCTGGCGTCAAGCGCGGTGTTAGCCCACGAACGTGATGCATGACAGCGCTGGCCACGCGC < 5:228720/149‑1 GCGTTCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGGTACTTCCTGATGCGCCAGCGGCTGGCGTCAAGCGCGGTGTTAGCCCACGAACGTGATGCATGACAGCGCTGGCCACGCG > 6:134055/1‑148 GAAGTACCCCGCCACCACCAGCAGTACCGTCAGCACCGTGAACCAGAATTGGAAACGCGATGCCGGGTCGAACGCCTGGGTGCCGATGACTGCCAGCAAGGCGAACAGCGCAATGATATTGGTGTAGGGGAACAGCCAGGCACGGAAGGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5000473‑5000321 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgttCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGGTACTTCCTGATGCGCCAGCGGCTGGCGTCAAGCGCGGTGTTAGCCCACGAACGTGATGCATGACAGCGCTGGCCACGCGC > NC_002947/5000404‑5000547 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |