New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5000321 =49 (0.860)4 (0.070) 4/246 NT 7.7% coding (1174/1383 nt) PP_4407 gamma‑aminobutyrate transporter
?NC_002947 5000404 = 50 (0.930)coding (1257/1383 nt) PP_4407 gamma‑aminobutyrate transporter

GAAGTACCCCGCCACCACCAGCAGTACCGTCAGCACCGTGAACCAGAATTGGAAACGCGATGCCGGGTCGAACGCCTGGGTGCCGATGACTGCCAGCAAGGCGAACAGCGCAATGATATTGGTGTAGGGGAACAGCCAGGCACGGAAGGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5000473‑5000321
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgttCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGGTACTTCCTGATGCGCCAGCGGCTGGCGTCAAGCGCGGTGTTAGCCCACGAACGTGATGCATGACAGCGCTGGCCACGCGC  >  NC_002947/5000404‑5000547
                                                                                                                                                                                                                                                                                                         
GAAGTACCCCGCCACCACCACCAGTACCGTCACCACCCTGAACCACAATTGGAAACGCGATGCCGCGTCGAACGCCTGGGTGCCGATGACTGCCAGCAAGGCGAACAGCGCAATGATATTGGTGTAAGGGAACAGCCAGGCACGCAAGG                                                                                                                                                      >  6:151352/1‑149
                                                               CGGGTCGAACGCCTGGGTGCCGATGACTGCCAGCAAGGCGAACAGCGCAATGATATTGGTGTAGGGGAACAGCCAGGCACGGAAGGCGTTCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGG                                                                                       >  7:240680/1‑149
                                                                     GAACGCCTGGGTGCCGATGACTGCCAGCAAGGCGAACAGCGCAATGATATTGGTGTAGGGGAACAGCCAGGCACGGAAGGCGTTCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGG                                                                                  >  5:113714/1‑148
                                                                                            CCAGCAAGGCGAACAGCGCAATGATATTGGTGTAGGGGAACAGCCAGGCACGGAAGGCGTTCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGGTACTTCCTGATGCGCCAGCGGCT                                                           <  8:240680/148‑1
                                                                                              AGCAAGGCGAACAGCGCAATGATATTGGTGTAGGGGAACAGCCAGGCACGGAAGGCGTTCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGGTACTTCCTGATGCGCCAGCGGCTGGC                                                        <  6:113714/149‑1
                                                                                                                                                    GCGTTCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGGTACTTCCTGATGCGCCAGCGGCTGGCGTCAAGCGCGGTGTTAGCCCACGAACGTGATGCATGACAGCGCTGGCCACGCGC  <  5:228720/149‑1
                                                                                                                                                    GCGTTCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGGTACTTCCTGATGCGCCAGCGGCTGGCGTCAAGCGCGGTGTTAGCCCACGAACGTGATGCATGACAGCGCTGGCCACGCG   >  6:134055/1‑148
                                                                                                                                                                                                                                                                                                         
GAAGTACCCCGCCACCACCAGCAGTACCGTCAGCACCGTGAACCAGAATTGGAAACGCGATGCCGGGTCGAACGCCTGGGTGCCGATGACTGCCAGCAAGGCGAACAGCGCAATGATATTGGTGTAGGGGAACAGCCAGGCACGGAAGGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5000473‑5000321
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgttCGACCCGGCATCGCGTTTCCAATTCTGGTTCACGGTGCTGACGGTACTGCTGGTGGTGGCGGGGTACTTCCTGATGCGCCAGCGGCTGGCGTCAAGCGCGGTGTTAGCCCACGAACGTGATGCATGACAGCGCTGGCCACGCGC  >  NC_002947/5000404‑5000547

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.