| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5140943 | 55 (0.970) | 4 (0.070) | 4/252 | NT | 6.4% | coding (619/894 nt) | PP_4525 | LysR family transcriptional regulator |
| ? | NC_002947 | = 5140970 | 63 (1.150) | coding (592/894 nt) | PP_4525 | LysR family transcriptional regulator | |||||
ACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5140819‑5140943‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtCTGGAGGCCTGGTATGCCCATGCCCATACGCCAATGGGGCGGGTGATGGAGATCGAGTCGTACCAGAGCATGCTGGCCTGTGTGATCGCGGGTGCGGGTGTGGCGATGATGGCCCAGTCGATGCTCGACAGCCTGCCTGGGCGT < NC_002947/5140970‑5140827 ACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATG‑‑GGCCTGGTATGCCCATGCC < 4:179017/147‑1 CCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTCTGGAGGCCTGGTATGCCCATGCCCATACGCCAAT < 4:289338/149‑1 GCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTCTGGAGGCCTGGTATGCCCATGCCCATACGCCAATG > 3:192995/1‑145 GCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTCTGGAGGCCTGGTATGCCCATGCCCATACGCCAATG < 4:192995/145‑1 GCGTCTGGAGGCCTGGTATGCCCATGCCCATACGCCAATGGGGCGGGTGATGGAGATCGAGTCGTACCAGAGCATGCTGGCCTGTGTGATCGCGGGTGCGGGTGTGGCGATGATGGCCCAGTCGATGCTCGACAGCCTGCCTGGGCGT > 2:334889/1‑148 GTCTGGAGGCCTGGTATGCCCATGCCCATACGCCAATGGGGCGGGTGATGGAGATCGAGTCGTACCAGAGCATGCTGGCCTGTGTGATCGCGGGTGCGGGTGTGGCGATGATGGCCCAGTCGATGCTC < 3:284506/128‑1 GTCTGGAGGCCTGGTATGCCCATGCCCATACGCCAATGGGGCGGGTGATGGAGATCGAGTCGTACCAGAGCATGCTGGCCTGTGTGATCGCGGGTGCGGGTGTGGCGATGATGGCCCAGTCGATGCTC > 4:284506/1‑128 ACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5140819‑5140943‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtCTGGAGGCCTGGTATGCCCATGCCCATACGCCAATGGGGCGGGTGATGGAGATCGAGTCGTACCAGAGCATGCTGGCCTGTGTGATCGCGGGTGCGGGTGTGGCGATGATGGCCCAGTCGATGCTCGACAGCCTGCCTGGGCGT < NC_002947/5140970‑5140827 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |