| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5552336 | 60 (1.060) | 4 (0.070) | 4/246 | NT | 6.2% | coding (1565/1566 nt) | PP_4882 | iron ABC transporter permease |
| ? | NC_002947 | = 5552369 | 65 (1.210) | intergenic (+32/+629) | PP_4882/PP_5717 | iron ABC transporter permease/hypothetical protein | |||||
GCCCGACCGGCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5552183‑5552336‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcttgTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCTTGTTCAAATACATCCGCGTAGTCAGCAAATACACCGGCAACCCCGACACCACAATCAACAACGCCGCATACGGCGCCGCCGCCGCGAACTCGACGTTGGCTGTGTG < NC_002947/5552369‑5552224 GCCCGACCGGCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAG < 1:336863/149‑1GCCCGACCGGCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAG > 3:197188/1‑149 CACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGTGCCCAGGCCA > 1:45808/1‑149 ACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGG > 1:335593/1‑99 ACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGG < 2:335593/99‑1 AGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCTTGTTCAAATACA < 2:45808/149‑1 CGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCTTG > 3:285476/1‑85 CGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCTTG < 4:285476/85‑1 AGGCTTGTGCCCAGGCCACATCGCGGCCTGGGCAAGCTTTCAAGCCTTGTTCAAATACATCCGCGTAGTCAGCAAATACACCGGCAACCCCGACACCACAATCAACAACGCCGCATACGGCGCCGCCGCCGCGAACTCGACGTTGGCT < 7:115569/148‑1 AGGCGTGTGCCCAGGCCAGATGGCGGCGTGGGCAAGCTTTCATGCCTTGTTGAAATACATCCGCGTAGTCAGCAAATAGACCGGCAACCCGGAGACCACAATCATCAACGCCGCTTACGGCGCCGCCGCCGCGAACTCGACGTTGGCT < 8:179444/148‑1 CTTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCTTGTTCAAATACATCCGCGTAGTCAGCAAATACACCGGCAACCCCGACACCACAATCAACAACGCCGCATACGGCGCCGCCGCCGCGAACTCGACGTTGGCTGTGT < 8:38370/149‑1 TTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCTTGTTCAAATACATCCGCGTAGTCAGCAAATACACCGGCAACCCCGACACCACAATCAACAACGCCGCATACGGCGCCGCCGCCGCGAACTCGACGTTGGCTGTGTG > 3:190595/1‑149 TTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCTTGTTCAAATACATCCGCGTAGTCAGCAAATACACCGGCAACCCCGACACCACAATC < 5:370447/99‑1 TTGTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCTTGTTCAAATACATCCGCGTAGTCAGCAAATACACCGGCAACCCCGACACCACAATC > 6:370447/1‑99 GCCCGACCGGCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5552183‑5552336‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcttgTGCCCAGGCCACATGGCGGCCTGGGCAAGCTTTCAAGCCTTGTTCAAATACATCCGCGTAGTCAGCAAATACACCGGCAACCCCGACACCACAATCAACAACGCCGCATACGGCGCCGCCGCCGCGAACTCGACGTTGGCTGTGTG < NC_002947/5552369‑5552224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |