New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5552336	60 (1.060)	4 (0.070)	4/246	NT	6.2%	coding (1565/1566 nt)	PP_4882	iron ABC transporter permease
	?	NC_002947	= 5552369	65 (1.210)					intergenic (+32/+629)	PP_4882/PP_5717	iron ABC transporter permease/hypothetical protein

CACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGA  >  NC_002947/5552224‑5552515                                                                                                                                                   |                                                                                                                                                   cacacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCAcaa                                                                                                                                                 >  3:190595‑M2/1‑146 (MQ=255)  acacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCAcaag                                                                                                                                                <  8:38370‑M2/149‑5 (MQ=255)      aGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCGATGTGGCCTGGGCAcaagcct                                                                                                                                             <  7:115569‑M2/148‑8 (MQ=255)      aGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTAAGCGGCGTTGATGATTGTGGTCTCCGGGTTGCCGGTCTATTTGCTGACTA‑CGCGGATGTATTTCAACAAGGCATGAAAGCTTGCCCACGCCGCCATCTGGCCTGGGCAcacgcct                                                                                                                                             <  8:179444‑M2/148‑8 (MQ=255)         cAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGt                                                                                                                                         <  4:107638/149‑1 (MQ=255)            cGTCGAGTTCGCGGCGGCGGCTGCGTATGCGGAGTTGTTGTTTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGGGGTTGTATTTGAACAAGGCTTGAATGCTTGCGCAGGCCTCCTTTTTGCGTGGGCACAAGCCTGAGTGcc                                                                                                                                      <  8:115569/149‑1 (MQ=255)             gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGcc                                                                                                                                      >  4:347403/1‑148 (MQ=255)             gTCGAGTTAGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTCCCCGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCAGAGTGcc                                                                                                                                      >  3:16962/1‑148 (MQ=255)                gAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGa                                                                                                                                  <  2:203565/149‑1 (MQ=255)                     cgcgGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTtc                                                                                                                              <  3:347403/148‑1 (MQ=255)                      gcggcggcggcgCCGTATGCGGCGTTGTTGTTTGGGGTGTCGGGGTTGCCGGTGTATTTGCTGTCTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCGATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTtcat                                                                                                                            <  7:179444/149‑1 (MQ=255)                      gcggcggcggcgCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTtca                                                                                                                             <  1:17139/148‑1 (MQ=255)                       cggcggcggcgCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTtcat                                                                                                                            >  4:351387/1‑148 (MQ=255)                       cggcggcggcgCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTtcat                                                                                                                            <  3:351387/148‑1 (MQ=255)                            gcggcgCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAg                                                                                                                      <  4:197188/149‑1 (MQ=255)                                   cGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATAACAAGTTCACtt                                                                                                               >  4:211824/1‑149 (MQ=255)                                    gTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACtt                                                                                                               >  4:324408/1‑148 (MQ=255)                                      aTGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACCGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACttt                                                                                                              >  1:271973/1‑148 (MQ=255)                                       tGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTtcat                                                                                                                            >  6:11272/1‑132 (MQ=255)                                        gcggcgTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTaaa                                                                                                           >  7:91078/1‑148 (MQ=255)                                             gttgttGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAActct                                                                                                      >  6:134398/1‑148 (MQ=255)                                                 ttgATTGTGGTGTCGGGGTTGCCTGTGTATTTGCTGACTA‑CTCGGATGTATATGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCGTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTa                                                                                                 <  4:16962/149‑1 (MQ=255)                                                 ttgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCAc                                                                                                   >  2:234487/1‑147 (MQ=255)                                                 ttgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTa                                                                                                 <  7:38370/149‑1 (MQ=255)                                                 ttgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTa                                                                                                 <  8:193110/149‑1 (MQ=255)                                                   gATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCAcaa                                                                                                                                                 <  5:370447‑M2/99‑4 (MQ=255)                                                   gATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCAcaa                                                                                                                                                 >  6:370447‑M2/1‑96 (MQ=255)                                                   gATTGTGGAGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAg                                                                                                >  3:205039/1‑148 (MQ=255)                                                        tggtgTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCAc                                                                                                                 <  1:215651/126‑1 (MQ=255)                                                        tggtgTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCAc                                                                                                                 >  2:215651/1‑126 (MQ=255)                                                             tCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAg                                                                                     <  5:134398/149‑1 (MQ=255)                                                                        ggTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCTTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGa                                                                                        <  1:79418/135‑1 (MQ=255)                                                                        ggTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                                                      >  7:182747/1‑137 (MQ=255)                                                                        ggTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                                                      <  8:182747/137‑1 (MQ=255)                                                                        ggTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGa                                                                                        >  2:79418/1‑135 (MQ=255)                                                                         gtgtATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAgg                                                                         >  3:93748/1‑149 (MQ=255)                                                                              tttGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTa                                                                    <  3:324408/149‑1 (MQ=255)                                                                                tGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAg                                                                   <  1:234487/148‑1 (MQ=255)                                                                                tGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTCGCCTGTGCACAAGCATGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGACAGTTTAATGCAAAGAACAAGGTCGTAg                                                                   >  4:310478/1‑148 (MQ=255)                                                                                tGCTCACTA‑CCCGGATGTATTAGAACAAGGCTTGAAAGCTTGCCCACCCCGCCATCACGCCTGGGCACAATCCTGACTGCATAGACTTCATCACAACATCAATTTAAACCTCTCACTAAACAGTTGAAAGCAAAGAACAAGATCGAAg                                                                   >  4:315625/1‑148 (MQ=255)                                                                                 gCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGa                                                                  <  5:194115/148‑1 (MQ=255)                                                                                     aCTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc                                                                       <  3:815/139‑1 (MQ=255)                                                                                     aCTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc                                                                       >  4:815/1‑139 (MQ=255)                                                                                       tA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGAtactac                                                            >  8:30193/1‑148 (MQ=255)                                                                                             ggATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGc                                                        >  1:350871/1‑147 (MQ=255)                                                                                             ggATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGc                                                        <  2:350871/147‑1 (MQ=255)                                                                                             agATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGccc                                                      >  3:280131/2‑149 (MQ=255)                                                                                                tGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCAcaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgccgccgccgcgaact                                                   <  2:45808‑M2/149‑98 (MQ=255)                                                                                                 gTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCcccacc                                                  >  2:134950/1‑149 (MQ=255)                                                                                                    tttGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCcccaccc                                                 >  7:208576/1‑147 (MQ=255)                                                                                                    tttGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCAAGTTGAAAGCAAAGAACAAGTTCGTAGATACTACAAG‑cccaccca                                                >  7:151795/1‑147 (MQ=255)                                                                                                       gAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAaga                                             <  4:93748/148‑1 (MQ=255)                                                                                                       gAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAaga                                             <  8:208576/148‑1 (MQ=255)                                                                                                         aCAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTTGCATGGGCACAAGCATGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAggg                                          <  3:211824/149‑1 (MQ=255)                                                                                                          cAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCAcaagccttgttcaaatacatccgcgtagtcagcaaatacaccg                                                                                                         <  4:285476‑M2/85‑44 (MQ=255)                                                                                                          cAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCAcaagccttgttcaaatacatccgcgtagtcagcaaatacaccg                                                                                                         >  3:285476‑M2/1‑42 (MQ=255)                                                                                                             ggCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTaa                                       >  3:196419/1‑148 (MQ=255)                                                                                                                ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACaa                                    >  3:326972/1‑148 (MQ=255)                                                                                                                  gAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAAc                                 >  2:359431/1‑149 (MQ=255)                                                                                                                          gCCCAGGCCACATGGCGGCCTGGGCTCAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACATGGTCGTAGATACTACAAGCCCCACCCAaga                                             >  7:234381/1‑129 (MQ=255)                                                                                                                          gCCCAGGCCACATGGCGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAaga                                             <  8:238596/129‑1 (MQ=255)                                                                                                                          gCCCAGGCCACATGGCGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAaga                                             >  7:238596/1‑129 (MQ=255)                                                                                                                           cccAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTGTCa                         >  8:322307/1‑148 (MQ=255)                                                                                                                             cAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCcccaccc                                                 <  4:176621/122‑1 (MQ=255)                                                                                                                             cAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAg                      <  5:157355/149‑1 (MQ=255)                                                                                                                             cAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAACCcccaccc                                                 >  3:176621/1‑122 (MQ=255)                                                                                                                                gccgccATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAAc                                      <  7:283818/130‑1 (MQ=255)                                                                                                                                gccgccATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAAc                                      >  8:283818/1‑130 (MQ=255)                                                                                                                                gccgccATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGAcc                   >  8:63732/1‑149 (MQ=255)                                                                                                                                    ccATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTgg               <  4:326972/149‑1 (MQ=255)                                                                                                                                     cATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTgg               >  6:126068/1‑148 (MQ=255)                                                                                                                                         tgGCCTGGGCAcaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgccgccgccgcgaactcgacgttggctgtgtgtgcccacacctcggtggccagggtg          >  1:45808‑M2/1‑11 (MQ=255)                                                                                                                                         tgGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAAc          <  1:134950/149‑1 (MQ=255)                                                                                                                                            ccTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCt       <  2:271973/149‑1 (MQ=255)                                                                                                                                             cTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTc      <  4:196419/149‑1 (MQ=255)                                                                                                                                              tGGGCACAAGCCTGAGTGCATAGACTTCATAACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCTTAGAAACTACAAGCCCCACCCAACATGGTAACAAAAAACTTTTAATAGACCTTCGGAAAccc        >  8:299731/1‑146 (MQ=255)                                                                                                                                                ggCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCATTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCg     <  4:233383/147‑1 (MQ=255)                                                                                                                                                 gCACAAGGCTGAGTGCCTAGACTTCATCACAAGTTCTCTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCACGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCgaga  <  7:299731/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                   CACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTA‑CGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGA  >  NC_002947/5552224‑5552515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.