New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5572514 = | 54 (0.950) | 3 (0.060) | 3/246 | NT | 6.2% | coding (251/543 nt) | orn | oligoribonuclease |
? | NC_002947 | 5572567 = | 40 (0.750) | coding (198/543 nt) | orn | oligoribonuclease |
AGCGAGCTCAATACCTTGGCCGAAGGGCCGGTGATCGCCATCCACCACAGTGACGAAGTGCTGGCGCGCATGGACGAGTGGAACACCCGCACCCATGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5572665‑5572514 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaagcACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCGATGATGACGTCGCTGTCCG > NC_002947/5572567‑5572709 AGCGAGCTCAATACCTTGGCCGAAGGGCCGGTGATCGCCATCCACCACAGTGACGAAGTGCTGGCGCGCATGGACGAGTGGAACACCCGCACCCATGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCG > 3:22024/1‑148 AGCGAGCTCAATACCTTGGCCGAAGGGCCGGTGATCGCCATCCACCACAGTGACGAAGTGCTGGCGCGCATGGACGAGTGGAACACCCGCACCCATGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCG > 4:230059/1‑148 CATGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAA < 7:103742/143‑1 CATGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAA > 8:103742/1‑143 CGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAAGCACCATGGGTGCGGGTGTTCCACTAGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTG > 3:322090/1‑149 CCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCGATGATGACGTCGCTGTCC < 7:306057/149‑1 CCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCGATGATGACGTCGCTGTCC > 7:341535/1‑149 CCGAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCGATGATGACGTCGCTGTCC < 8:341535/149‑1 GAAGCACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCCCTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCGATGATGACGTCGCTGTCCG > 1:298852/1‑148 AGCGAGCTCAATACCTTGGCCGAAGGGCCGGTGATCGCCATCCACCACAGTGACGAAGTGCTGGCGCGCATGGACGAGTGGAACACCCGCACCCATGGTGCTTCGGGGCTGACCCAGCGCGTACGCGAGAGCAAGGTCAGCATGGCCGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5572665‑5572514 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaagcACCATGGGTGCGGGTGTTCCACTCGTCCATGCGCGCCAGCACTTCGTCACTGTGGTGGATGGCGATCACCGGCCCTTCGGCCAAGGTATTGAGCTCGCTGTCGGTGACGATGGTGGCCATTTCGATGATGACGTCGCTGTCCG > NC_002947/5572567‑5572709 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |