New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5907241 = | 74 (1.310) | 5 (0.090) | 5/242 | NT | 7.2% | coding (726/1095 nt) | spuE | spermidine/putrescine ABC transporter substrate‑binding protein |
? | NC_002947 | 5907301 = | 61 (1.160) | coding (666/1095 nt) | spuE | spermidine/putrescine ABC transporter substrate‑binding protein |
CCTCAACCCGAACAGCACCGACCCCAAGGATTACGCCAAGGCCGAGCAGAAGCTGCTGGCCGTGCGCCCGTACGTGACCTACTTCCACTCGTCCAAGTACATCACCGACCTGGCCAATGGCGACATCTGCGTCGCGGCAGGTTTCTCGGGTGATGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5907397‑5907241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgatgtaCTTGGACGAGTGGAAGTAGGTCACGTACGGGCGCACGGCCAGCAGCTTCTGCTCGGCCTTGGCGTAATCCTTGGGGTCGGTGCTGTTCGGGTTGAGGCCCATGTAGTTGAGCACCGCTGGCAGCATTTCGTCCGCCGAGTCGAGG > NC_002947/5907301‑5907445 CCTCAACCCGAACAGCACCGACCCCAAGGATTACGCCAAGGCCGAGCAGAAGCTGCTGGCCGTGCGCCCGTACGTGACCTACTTCCACTCGTCCAAGTACATCACCGACCTGGCCAATGGCGACATCTGCGTCGCGGCAGGTTTCTCGG > 5:97506/1‑149 CTCAACCCGAACAGCACCGACCCCAAGGATTACGTCAAGGCCGAGCAGAAGCTGCTGGCCGTGCGCCCGTACGTGACCTACTTCCACTCGTCCAAGTACATCACCGACCTGGCCAATGGCGACATCTGCGTCGCGGCAGGTTTCTCGGG > 2:313540/1‑149 CTCAACCCGAACAGCACCGACCCCAAGGATTACGCCAAGGCCGAGCAGAAGCTGCTGGCCGTGCGCCCGTACGTGACCTACTTCCACTCGTCCAAGTACATCAACGACCTGGCCAATGGCGACATCTGCGTCGCGGCAGGTGTCTCGGG > 8:327542/1‑149 TCAACCCGAACAGCACCGACCCCAAGGATTACGCCAAGGCCGAGCAGAAGCTGCTGGCCGTGCGCCCGTACGTGACCTACTTCCACTCGTCCAAGTACATCACCGACCTGGCCAATGGTGACATCTGCGTCGCGGCAGGTTTCTCGGGT > 8:201337/1‑149 AACCCGAACAGCACCGACCCCAAGGATTACGCCAAGGCCGAGCAGAAGCTGCTGGCCGTGCGCCCGTACGTGACCTACTTCCACTCGTCCAAGTACATCACCGACCTGGCCAATGGCGACATCTGCGTCGCGGCAGGTTTCTCGGGTGA < 8:95645/149‑1 CCCGAACAGCACCGACCCCAAGGATTACGCCAAGGCCGAGCAGAAGCTGCTGGCCGTGCGCCCGTACGTGACCTACTTCCACTCGTCCAAGTACATCACCGACCTGGCCAATGGTGACATCTGCGTCGCGGCAGGTTTCTCGGGTGATG < 7:201337/149‑1 CCGAACAGCACCGACCCCAAGGATTATGCCAAGGCCGAGCAGAAGCTGCTGGCCGTGCGCCCGTACGTGACCTACTTCCACTCGTCCAAGTACATCACCGACCTGGCCAATGGCGACATCTGCGTCGCGGCAGGTTTCTCGGGTGATG > 5:216233/1‑148 CCGAACAGAACATACCCAAAGGATTACGCCAAGGCCGAGCAGAAGCTGCTGGCCGTGCGCCAGTACGTGACCTACTTCCACTCGTACAAGTACATCACCGACATCGCCAATGGCGACATCTGCGTCGCTGCAGTTATCTCGGGTGATG > 4:71000/1‑148 CTCGTCCAAGTACATCACCGACCTGGCCAATGGCGACATCTGCGTCGCGGCAGGTTTCTCGGGTGATGTACTTGGACGAGTGGAAGTAGGTCACGTACGGGCGCACGGCCAGCAGCTTCTGCTCGGCCTTGGCGTAATCCTTGGGGTCG > 6:109736/1‑149 CAAGTACATCACCGACCTGGCCAATGGCGACATCTGCGTCGCGGCAGGTTTCTCGGGTGATGTACTTGGACGAGTGGAAGTAGGTCACGTACGGGCGCACGGCCAGCAGCTTCTGCTCGGCCTTGGCGTAATCCTTGG < 3:340020/138‑1 CAAGTACATCACCGACCTGGCCAATGGCGACATCTGCGTCGCGGCAGGTTTCTCGGGTGATGTACTTGGACGAGTGGAAGTAGGTCACGTACGGGCGCACGGCCAGCAGCTTCTGCTCGGCCTTGGCGTAATCCTTGG > 4:340020/1‑138 AGTACATCACCGACCTGGCCAATGGCGACATCTGGGTCGCGGCAGGTTTCTCGGGTGATGTACTTGGACGAGTGGAAGTAGGTCACGTACGGGCGCACGGCCAGCAGCTTCTGCTCGGCCTTGGC < 5:21891/125‑1 CGACCTGGCCAATGGCGACATCTGCGTCGCGGCAGGTTTCTCGGGTGATGTACTTGGACGAGTGGAAGTAGGTCACGTACGGGCGCACGGCCAGCAGCTTCTGCTCGGCCTTGGCGTAATCCTTGGGGTCGGTGCTGTTCGGGTTGAGG < 5:109736/149‑1 ATGTACTTGGACGAGTGGAAGTAGGTCACGTACGGGCGCACGGCCAGCAGCTTCTGCTCGGCCTTGGCGTAATCCTTGGGGTCGGTGCTGTTCGGGTTGAGGCCCATGTAGTTGAGCACCGCTGGCAGCATTTCGTCCGCCGAGTCGA < 8:199619/148‑1 TGTACTTGGACGAGTGGAAGTAGGTCACGTACGGGCGCACGGCCAGCAGCTTCTGCTCGGCCTTGGCGTAATCCTTGGGGTCGGTGCTGTTCGGGTTGAGGCCCATGTAGTTGAGCACCGCTGGCAGCATTTCGTCCGCCGAGTCGAGG < 1:128566/149‑1 CCTCAACCCGAACAGCACCGACCCCAAGGATTACGCCAAGGCCGAGCAGAAGCTGCTGGCCGTGCGCCCGTACGTGACCTACTTCCACTCGTCCAAGTACATCACCGACCTGGCCAATGGCGACATCTGCGTCGCGGCAGGTTTCTCGGGTGATGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5907397‑5907241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgatgtaCTTGGACGAGTGGAAGTAGGTCACGTACGGGCGCACGGCCAGCAGCTTCTGCTCGGCCTTGGCGTAATCCTTGGGGTCGGTGCTGTTCGGGTTGAGGCCCATGTAGTTGAGCACCGCTGGCAGCATTTCGTCCGCCGAGTCGAGG > NC_002947/5907301‑5907445 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |