New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6017090	64 (1.130)	4 (0.070)	3/252	NT	6.7%	coding (244/423 nt)	PP_5267	cytochrome c5
	?	NC_002947	= 6017126	49 (0.890)					coding (208/423 nt)	PP_5267	cytochrome c5

CCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6016939‑6017090 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCGCCGACCACCAGGGCGGTCTGGATGGCATCCTGGCCAAGGCCATTACTGGTATCAACGCCATGCCGCCA  <  NC_002947/6017126‑6016980                                                                                                                                                                                                                                                                                                             CCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGC                                                                                                                                                        <  6:126737/149‑1  CTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCG                                                                                                                                                       >  3:240109/1‑149  CTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCG                                                                                                                                                       >  4:152391/1‑149      CAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTCGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCC                                                                                                                                                     >  5:258902/1‑147                                             CGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGC                                                                                                            <  3:152391/149‑1                                               GCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGGCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGC                                                                                                          <  2:225695/149‑1                                                                       CCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGC                                                                                                          <  1:185074/125‑1                                                                       CCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCCAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGC                                                                                                          >  2:185074/1‑125                                                                                                                                                      GCCAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCGCCGACCACCAGGGCGGTCTGGATGGCATCCTGGCCAAGGCCATTACTGGTATCAACGCCATGCCGC    >  8:47813/1‑148                                                                                                                                                        CAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCGCCGACCACCAGGGCGGTCTGGATGGCATCCTGGCCAAGGCCATTACTGGTATCAACGCCATGCCGCCA  >  7:212002/1‑148                                                                                                                                                        CAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCGCCGACCACCAGGGCGGTCTGGATGGCATCCTGGCCAAGGCCATTACTGGTATCAACGC            >  7:71547/1‑138                                                                                                                                                        CAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCGCCGACCACCAGGGCGGTCTGGATGGCATCCTGGCCAAGGCCATTACTGGTATCAACGC            <  8:71547/138‑1                                                                                                                                                                                                                                                                                                             CCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGCCATCCAGACCGCCCTGGTGGTCGGCGCGTTCTTTCCACGCGGCGGTGTCACCAATTTTAGGCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6016939‑6017090 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCGCCGACCACCAGGGCGGTCTGGATGGCATCCTGGCCAAGGCCATTACTGGTATCAACGCCATGCCGCCA  <  NC_002947/6017126‑6016980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.